Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0455.Seq
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF127924-1|AAD26359.2|  397|Drosophila melanogaster odorant rece...    29   7.0  
AE014134-268|AAF51363.1|  397|Drosophila melanogaster CG4231-PA ...    29   7.0  

>AF127924-1|AAD26359.2|  397|Drosophila melanogaster odorant
           receptor DOR67 protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 423 TISQSFILAHTYLEIG*LNVIF**CENNQTGHVIFMNCLEMVNMPFDISC 274
           TI   F+L    L +  +N++F    +     V+FM+C+ M   PF   C
Sbjct: 268 TIFVQFLLIGIVLGLSMINIMFFSTLSTGVAVVLFMSCVSMQTFPFCYLC 317


>AE014134-268|AAF51363.1|  397|Drosophila melanogaster CG4231-PA
           protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 423 TISQSFILAHTYLEIG*LNVIF**CENNQTGHVIFMNCLEMVNMPFDISC 274
           TI   F+L    L +  +N++F    +     V+FM+C+ M   PF   C
Sbjct: 268 TIFVQFLLIGIVLGLSMINIMFFSTLSTGVAVVLFMSCVSMQTFPFCYLC 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,296,502
Number of Sequences: 53049
Number of extensions: 379194
Number of successful extensions: 444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)