Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0454.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    29   0.096
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    29   0.096

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 0.096
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 474 QIIYVKTIRILRLVTMCLMHVIFYSTYNTL*TNL-SDRTIYKIFKINFGSLCRLXAFG 644
           ++ Y    ++   +T+C  +V+ YS+YN    N+  D TI  I       L  L  FG
Sbjct: 319 KVWYAAVTQVFFSLTICFGNVMMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFG 376


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 29.5 bits (63), Expect = 0.096
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 474 QIIYVKTIRILRLVTMCLMHVIFYSTYNTL*TNL-SDRTIYKIFKINFGSLCRLXAFG 644
           ++ Y    ++   +T+C  +V+ YS+YN    N+  D TI  I       L  L  FG
Sbjct: 319 KVWYAAVTQVFFSLTICFGNVMMYSSYNRFHNNVYRDVTIVSIMDTLTSMLAGLIVFG 376


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,751
Number of Sequences: 2352
Number of extensions: 10954
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)