Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0453.Seq
(299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 105 6e-24
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 6e-04
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.029
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 0.47
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 0.47
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 1.1
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 1.1
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 1.9
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 1.9
U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical p... 27 1.9
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 1.9
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 1.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 2.5
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 2.5
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 2.5
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 27 3.3
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 26 4.4
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 26 4.4
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 26 4.4
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 26 4.4
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 26 4.4
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 26 4.4
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 26 4.4
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 26 4.4
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 26 4.4
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 26 4.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 26 5.8
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 26 5.8
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 25 7.6
U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidan... 25 7.6
U39674-2|AAY86211.1| 94|Caenorhabditis elegans Hypothetical pr... 25 7.6
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 25 7.6
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 105 bits (252), Expect = 6e-24
Identities = 51/80 (63%), Positives = 61/80 (76%)
Frame = -2
Query: 292 LVYDHGRP*LGAWGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 113
L Y G +G G I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +SLP
Sbjct: 179 LAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLP 238
Query: 112 RGKGIRLTIAEERDKRIAAK 53
G GIRL+IAEERDKR+A K
Sbjct: 239 TGAGIRLSIAEERDKRMAQK 258
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 39.1 bits (87), Expect = 6e-04
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 72
HHR E AH G HGTH H E H+ H G H + H P H G
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAHHGHHG 459
Query: 71 QAHRS 57
+ H +
Sbjct: 460 EHHHA 464
Score = 38.7 bits (86), Expect = 8e-04
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 87
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHRRGA 75
HH E H H G HGTH H GH G H A A GH H G
Sbjct: 467 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGEHGT 524
Query: 74 GQAHRSQGRRA 42
H + A
Sbjct: 525 HHGHHGEHHHA 535
Score = 35.1 bits (77), Expect = 0.009
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -1
Query: 212 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 63
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 35.1 bits (77), Expect = 0.009
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -1
Query: 260 GVGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 81
G HH P H G HG H H GH G H H P H
Sbjct: 628 GAHHHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-H 686
Query: 80 GAGQAHRSQG 51
G AH G
Sbjct: 687 GHHGAHHEHG 696
Score = 32.7 bits (71), Expect = 0.050
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 72
HH P H H HG H H H G G H H P H G
Sbjct: 509 HHHAPAHHGH---HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHG 565
Query: 71 QAHRS 57
+ H +
Sbjct: 566 EHHHA 570
Score = 32.7 bits (71), Expect = 0.050
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -1
Query: 254 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
GHH H H G HG H H H+ GH G H A H HH
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAHHHHA--PHHEHHEHH 643
Query: 77 AGQAHRSQG 51
H S G
Sbjct: 644 GDHHHGSHG 652
Score = 32.3 bits (70), Expect = 0.067
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHR 84
HH E H H G HG+ H HE H+ H G H H HH
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHG 617
Query: 83 RGAGQAHRSQG 51
G G H G
Sbjct: 618 AGYGAHHGHHG 628
Score = 32.3 bits (70), Expect = 0.067
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = -1
Query: 254 GHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAARQGHPP--- 93
G H T L H H G HGTH H H+ HE G H A H
Sbjct: 652 GVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKEN 711
Query: 92 HHRRGAGQAH 63
HH G H
Sbjct: 712 HHHHGHHSKH 721
Score = 30.3 bits (65), Expect = 0.27
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -1
Query: 206 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 42
AH G HG H H H+ GH G H GH H A H + A
Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 30.3 bits (65), Expect = 0.27
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = -1
Query: 206 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 63
AH G HG H H H G H G H GH H A H
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGA 75
HH P H HG H H GH G H + A G H HH A
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEH------GTHHGHHGSHHSPAHHGHHGEHHHAPA 514
Query: 74 GQAHRSQ 54
H +
Sbjct: 515 HHGHHGE 521
Score = 29.1 bits (62), Expect = 0.62
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -1
Query: 206 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 54
AH G HG H H G GVH + H H A H +
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 0.62
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 212 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH-RRGAGQAH 63
H H G H +H H G GVH G+ HH GA H
Sbjct: 583 HGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Frame = -1
Query: 254 GHHRVPRETSRLLRHCAHQGLH----GTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 87
G H P H H G H H HE H+ H G H H P H
Sbjct: 411 GTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHH---GEHHHAPAH 467
Query: 86 RRGAGQAHRS 57
G+ H +
Sbjct: 468 HGHHGEHHHA 477
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/68 (25%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = -1
Query: 251 HHRVPRETSRLLRHCAHQGLHG---THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 81
HH P H H G HG + H H+ H G H G H
Sbjct: 532 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHE 591
Query: 80 GAGQAHRS 57
G H +
Sbjct: 592 SHGHGHHA 599
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = -1
Query: 224 RLLRHCAHQGLHGT-HLRHEVE-QRVHNRQGHEG-------VHLAAARQGHPPHHRRGAG 72
+L R A LH HL E+ Q+V + H+G + + GH HH GA
Sbjct: 30 KLTRDEARSALHDIEHLAKELHFQKVFDHHAHDGHISLKGFLSFISPHHGHHTHHAHGAH 89
Query: 71 QAH 63
H
Sbjct: 90 PGH 92
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -1
Query: 206 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 54
AH G HG H H H G G H H HH A H +
Sbjct: 501 AHHGHHGEH--HHAPAH-HGHHGEHGTH----HGHHGEHHHAPAHHGHHGE 544
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Frame = -1
Query: 206 AHQGLHGTH----LRHEVEQRVHNRQGHEGVH-LAAARQGHPPHHRRGAGQAHRSQGRRA 42
AH G HG H H H+ H G H GH H A H + A
Sbjct: 453 AHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 512
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.029
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 212 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 51
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 0.078
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 212 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 87
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 197 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 48
G HG H RH R GH G +R G P G H GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333
Score = 21.4 bits (43), Expect(2) = 0.078
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 98 PPHHRRGAGQAHRSQGRRA 42
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 100 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 189
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 227 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 51
+R RH H+G HG ++H H H R G H P+ H +
Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143
Query: 50 RRAV 39
+R++
Sbjct: 144 KRSI 147
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 155 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 60
VH+ H+G H R+ H HH G H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = -1
Query: 203 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H G TH H+ + GH G H + + H H G
Sbjct: 43 HHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84
>U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical
protein R12C12.1a protein.
Length = 979
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 165 NLVAKVCPVESLMCTMSKEPGCLSRDTMVPHAPSYGLP*SY 287
+LV VC + SL T+ + PG L D V A +G+P Y
Sbjct: 255 SLVIMVCDLLSL--TILRSPGDLGADIAVGSAQRFGVPLGY 293
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 105 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 221
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 105 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 221
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 252 APSCPARDIPAPSTLCTSRTPRDTPSP 172
AP CP PAP+ C P TPSP
Sbjct: 107 APCCPPP--PAPAAPCCPPPPPPTPSP 131
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 103 PCRAAARCTPSCPCRL*TRCSTSWRRCVP-WSP*CAQCRRSRDVSRGTRWCPTPQVTASR 279
P AA+C P C R S + C+P SP C Q + + P Q T +
Sbjct: 345 PTPCAAQCMPLCESSCIARLSCV-QTCMPACSPTCVQNYAAGPIQCAPACMPLCQPTCVQ 403
Query: 280 DHTQV 294
H +V
Sbjct: 404 QHAEV 408
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 227 SRLLRHCA--HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 99
S LL CA H G+ L+H V + G +HLAA GH
Sbjct: 842 SPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAF-NGH 885
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 255 GAPSCPARDIPAPSTLCTSRTPRDTPSPRG 166
GAP P +D P+ + P+ TP P+G
Sbjct: 166 GAPGQPGQDAPSEPITPGAPGPQGTPGPQG 195
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 255 GAPSCPARDIPAPSTLCTSRTPRDTPSPRG 166
GAP P +D P+ + P+ TP P+G
Sbjct: 199 GAPGQPGQDAPSEPITPGAPGPQGTPGPQG 228
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = -1
Query: 197 GLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 63
G H H E HN H +H + G P R A H
Sbjct: 422 GSHEAHAHSATEHGAHNHSEHHQLHRSIFHHGAPTSIRSQAQVPH 466
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Frame = +1
Query: 97 GCP-CRAAARCTPSCPCR 147
G P C A + CTP C CR
Sbjct: 881 GAPKCEAGSACTPGCFCR 898
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 203 HQGLHGTHLRHEVEQRVHNRQGHEG 129
HQG HG + R H+R H G
Sbjct: 62 HQGNHGNSYGRREDDRSHSRDNHGG 86
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 64 CAC-PAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTS 171
C+C P P C C+A++ C SC CS+S
Sbjct: 16 CSCSPLPST--SSCGCQASSSCANSCRSTCRPTCSSS 50
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 869
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 895
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 869
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 895
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 708 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 736
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 841 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 869
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 173 HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 78
H + Q+ +NR G H ++ G PP H+RG
Sbjct: 867 HSILQQHNNRAGS---HSGSSGAGRPPTHQRG 895
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 267 NLGRGAPSCPARDIPAPSTLCTSRTPRDTPSP 172
N G G+ +C PA CTS+TP +P
Sbjct: 255 NQGSGSANCAPACQPACDNSCTSQTPAPMYNP 286
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 286 YDHGRP*LGAWGTIVSRERHPGSFDIVH 203
Y HG AWG I+ + R+PG+ ++
Sbjct: 141 YRHGDCRTQAWGMIIDKLRYPGTVPSIY 168
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 173 GEGVSRGVLDVHNVEGAGMSLAGHDGAPRP 262
GE G V+G G L GHDG P P
Sbjct: 367 GEAGPHGAQGFDGVQG-GKGLPGHDGLPGP 395
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 173 GEGVSRGVLDVHNVEGAGMSLAGHDGAPRP 262
GE G V+G G L GHDG P P
Sbjct: 367 GEAGPHGAQGFDGVQG-GKGLPGHDGLPGP 395
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 173 GEGVSRGVLDVHNVEGAGMSLAGHDGAPRP 262
GE G V+G G L GHDG P P
Sbjct: 366 GEAGPHGAQGFDGVQG-GKGLPGHDGLPGP 394
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR CT C TRC T R C
Sbjct: 66 CCCCRPRCC---CCCRPKCCCTCCRTCCC-TRCCTCCRPC 101
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 224 GMSLAG-HDGAPRPKLRPPVIIHKF 295
GM+ AG H GA + R PV+I KF
Sbjct: 256 GMTAAGSHGGASPDETRVPVVIWKF 280
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 224 GMSLAG-HDGAPRPKLRPPVIIHKF 295
GM+ AG H GA + R PV+I KF
Sbjct: 256 GMTAAGSHGGASPDETRVPVVIWKF 280
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR CT C TRC T R C
Sbjct: 68 CCCCRPRCC---CCCRPKCCCTCCRTCCC-TRCCTCCRPC 103
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +1
Query: 64 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 183
C C PR C CR CT C TRC T R C
Sbjct: 71 CCCCRPRCC---CCCRPKCCCTCCRTCCC-TRCCTCCRPC 106
>U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidance
abnormal protein11 protein.
Length = 189
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 144 PIMNTLFNLVAKVCPVESLMCTMSK 218
PI LF VAK CP C + K
Sbjct: 51 PIDRALFGKVAKFCPAYEKHCAVGK 75
>U39674-2|AAY86211.1| 94|Caenorhabditis elegans Hypothetical
protein C06E2.9 protein.
Length = 94
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 191 HGTHLRHEVEQ-RVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 69
H H +H + +H+R + V GH HH+ GQ
Sbjct: 49 HVEHQKHSLNDGHLHSRNS-KNVSRHFVNDGHAQHHKNNGGQ 89
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -1
Query: 254 GHH-RVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH 123
GHH V H H G H +E H+ GH G H
Sbjct: 41 GHHGHVDTHHHEESHHGEHHGGHHGVQHYESHHESHHHGGHHGHH 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,323,837
Number of Sequences: 27780
Number of extensions: 165439
Number of successful extensions: 737
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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