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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0451.Seq
         (588 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.92 
SB_35674| Best HMM Match : SH2 (HMM E-Value=0)                         31   0.92 
SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 30   1.6  
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_22454| Best HMM Match : Ribosomal_L35p (HMM E-Value=4.5)            29   2.1  
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)                       29   3.7  
SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79)                 28   4.9  
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)                     28   4.9  
SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.9  
SB_50377| Best HMM Match : NICE-3 (HMM E-Value=1.3)                    28   4.9  
SB_10985| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)                 28   4.9  
SB_50441| Best HMM Match : POR_N (HMM E-Value=3.5)                     28   6.5  
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)           28   6.5  
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)                     28   6.5  
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.5  
SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)                     27   8.6  
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_5058| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.6  
SB_38071| Best HMM Match : ABC_membrane (HMM E-Value=1.2e-11)          27   8.6  

>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1789

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582  KGRREKKKMKSEQDEAEREKEKAEN 508
            KG  EK K +SE+D+ E EK+K E+
Sbjct: 1513 KGESEKDKGESEKDKGESEKDKGES 1537



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582  KGRREKKKMKSEQDEAEREKEKAEN 508
            KG  EK K +SE+D+ E EK+K E+
Sbjct: 1520 KGESEKDKGESEKDKGESEKDKGES 1544



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582  KGRREKKKMKSEQDEAEREKEKAEN 508
            KG  EK K +SE+D+ E EK+K E+
Sbjct: 1527 KGESEKDKGESEKDKGESEKDKGES 1551



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582  KGRREKKKMKSEQDEAEREKEKAEN 508
            KG  EK K +SE+D+ E EKEK ++
Sbjct: 1534 KGESEKDKGESEKDKGESEKEKCQS 1558



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 588  SRKGRREKKKMKSEQDEAEREKEKAEN 508
            + K   EK K +SE+D+ E EK+K E+
Sbjct: 1504 ANKSESEKGKGESEKDKGESEKDKGES 1530


>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
          Length = 871

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAEN 508
           KG  EK K +SE+D+ E EK+K E+
Sbjct: 92  KGESEKDKGESEKDKGESEKDKGES 116



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAEN 508
           KG  EK K +SE+D+ E EK+K E+
Sbjct: 99  KGESEKDKGESEKDKGESEKDKGES 123



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAEN 508
           KG  EK K +SE+D+ E EK+K E+
Sbjct: 106 KGESEKDKGESEKDKGESEKDKGES 130



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAEN 508
           KG  EK K +SE+D+ E EKEK ++
Sbjct: 113 KGESEKDKGESEKDKGESEKEKCQS 137



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 588 SRKGRREKKKMKSEQDEAEREKEKAEN 508
           + K   EK K +SE+D+ E EK+K E+
Sbjct: 83  ANKSESEKGKGESEKDKGESEKDKGES 109


>SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1718

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +2

Query: 47  NNHNHTKH*SYYIECYCTVKLYIHVPAHGARPITKH*IITYINSERNPHVHGYQYETTDT 226
           N+ + TKH S    C  +  LY        + +    +   I + +N  V   +  ++D 
Sbjct: 109 NHSSETKH-SRESTCDVSPNLYSKPKQDEQKLLNDDNVDILIEAPQNDCVANEKGASSDV 167

Query: 227 YLLTHNMSLQ---SVKFEPNTRTVLKTNDNSIGIVEDCAT 337
            + +HNM  +    +  E     +++T DNS+GI+ D  T
Sbjct: 168 EV-SHNMGNKLPVEISKESRNNVIVQTGDNSLGIINDNGT 206


>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 897

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ I C  S VLYD  DC  +  L++ + C +S
Sbjct: 2   DCRLSCVLYDAIDCRLSCVLYDAIDCRLSCVLYVAIDCRLS 42



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 LLSVWHRVLGRECKVLLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           L SV +  +      +LY+ I C  S+VLYD  DC  +  L+  + C +S
Sbjct: 89  LSSVLYDAIDCRLSCVLYDAIDCRLSSVLYDAIDCRLSDVLYDAIDCRLS 138



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ I C  S+VLYD  DC  +  L+  + C +S
Sbjct: 74  DCRLSSVLYDAIDCRLSSVLYDAIDCRLSCVLYDAIDCRLS 114



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 LLSVWHRVLGRECKVLLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           L SV +  +      +LY+ I C  S+VLYD  DC  +  L+  + C +S
Sbjct: 221 LSSVLYDAIDCRLSSVLYDAIDCRLSDVLYDAIDCRLSGVLYDAIDCRLS 270



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 LLSVWHRVLGRECKVLLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           L SV +  +      +LY+ I C  S VLYD  DC  +  L+  + C +S
Sbjct: 113 LSSVLYDAIDCRLSDVLYDAIDCRLSGVLYDAIDCRLSGVLYDAIDCRLS 162



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ + C  S+VLYD  DC  +  L+  + C +S
Sbjct: 62  DCRLSCVLYDALDCRLSSVLYDAIDCRLSSVLYDAIDCRLS 102



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 149 LLSVWHRVLGRECKVLLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           L SV +  +      +LY+ I C  S VLYD  DC  +  L+  + C +S
Sbjct: 77  LSSVLYDAIDCRLSSVLYDAIDCRLSCVLYDAIDCRLSSVLYDAIDCRLS 126



 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ + C  S+VLYD  DC  +  L+  + C +S
Sbjct: 206 DCRLSCVLYDALDCRLSSVLYDAIDCRLSSVLYDAIDCRLS 246



 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ I C  S VLYD  DC  +  L+  + C +S
Sbjct: 50  DCRLSCVLYDAIDCRLSCVLYDALDCRLSSVLYDAIDCRLS 90



 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 116 ECKV--LLYNNIRCSSSNVLYDC-DCYCTVNLFLILSCEMS 3
           +C++  +LY+ I C  S VLYD  DC  +  L+  + C +S
Sbjct: 194 DCRLSCVLYDAIDCRLSCVLYDALDCRLSSVLYDAIDCRLS 234


>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1137

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 582  KGRREKKKMKSEQDEAEREKEKAE 511
            K +  +KKMK EQDE ER+K + E
Sbjct: 1032 KTKEGEKKMKDEQDEIERKKAEEE 1055


>SB_22454| Best HMM Match : Ribosomal_L35p (HMM E-Value=4.5)
          Length = 214

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 97  YSKTLHSRPSTRCQTDNKTLNNYIHQF*A*SPCTRISVRNNGHIF--TYTQHVPTIGKIR 270
           Y+ TLH  P+T  +  N+ LNN I       P ++ +  N GH F     +H P   K+R
Sbjct: 43  YNYTLHYEPNTTSKRKNRQLNNIIWYN---PPFSKNTSTNIGHRFLSLIDKHFPKDHKLR 99


>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
          Length = 934

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 310 YWNCRRLRNERF*KKNSPRTHTTYPEVLNVLALTN*SQQPTAHRVPP 450
           YWN  R R+ R  + +SPR  T    +     +T+ S  P     PP
Sbjct: 107 YWNSGR-RSPRHSRPSSPRCRTPRNNIFTTPMITSTSASPRGSMAPP 152


>SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79)
          Length = 364

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 269 EPNTRTVLKTNDNS-IGIVEDCATRGFKKRILHA 367
           EP   T+ +T DNS I I EDC+T    K I  A
Sbjct: 119 EPERLTIKETRDNSVISIEEDCSTDAEMKVIYDA 152


>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
          Length = 693

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -1

Query: 585 RKGRREKKKMKSEQD-EAEREKEK 517
           R+  REK+K K E+D E E+EKEK
Sbjct: 625 REKEREKEKEKEERDKEREKEKEK 648


>SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 97  YSKTLHSRPSTRCQTDNKTLNNYIHQF*A*SPCTRISVRNNGHIF--TYTQHVPTIGKIR 270
           Y+ TLH  P+T  +  N+  NN I       P ++ +  N GH F     QH P   K+R
Sbjct: 51  YNYTLHYEPNTTNKLKNRQCNNIIWYN---PPFSKNTSTNIGHRFFSLIDQHFPKDHKLR 107


>SB_50377| Best HMM Match : NICE-3 (HMM E-Value=1.3)
          Length = 580

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +2

Query: 131 GARPITKH*IITYINSERNPHVHGYQY-ETTDTYLLTHNMSLQSVKFEPNTRTVLKTNDN 307
           GA    +  I  Y   ++   V GY+  +  D  +L+ N+ +     + N+ ++  +ND 
Sbjct: 131 GANSKKQKSIPQYFRKQKRREVVGYKRGDELDKNILSKNIYID---IKENSGSIQISNDA 187

Query: 308 SIGIVEDCATRGFKKRILHARTLRT 382
           S   +EDC T G  +   H   + +
Sbjct: 188 SKEDLEDCVTDGRSRNTYHINIMNS 212


>SB_10985| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)
          Length = 320

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 269 EPNTRTVLKTNDNS-IGIVEDCATRGFKKRILHA 367
           EP   T+ +T DNS I I EDC+T    K I  A
Sbjct: 33  EPERLTIKETRDNSAISIEEDCSTDAEMKVIYDA 66


>SB_50441| Best HMM Match : POR_N (HMM E-Value=3.5)
          Length = 439

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 97  YSKTLHSRPSTRCQTDNKTLNNYIHQF*A*SPCTRISVRNNGHIF--TYTQHVPTIGKIR 270
           Y+ TLH  P+T  +  N+  NN I       P ++ +  N GH F     +H P   K+R
Sbjct: 347 YNYTLHYEPNTTSKRKNRQRNNIIWYN---PPFSKYTSTNIGHRFLSLIDKHFPKDHKLR 403


>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
          Length = 479

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 567 KKKMKSEQDEAEREKEKAE 511
           KK MK  + EAE+EK+KAE
Sbjct: 150 KKAMKKMEKEAEKEKKKAE 168


>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
          Length = 422

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 585 RKGRREKKKMKSEQDEAEREKEK 517
           R  + EK K K+ ++E EREKEK
Sbjct: 144 RMKKEEKHKEKTRKEEKEREKEK 166


>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 237

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -1

Query: 585 RKGRREKKKMKSEQDEAE--REKEKAE 511
           +K +++KKK K E+DE E  + KEK E
Sbjct: 200 KKKKKKKKKKKEEEDEKEDKQRKEKTE 226


>SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 268

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 97  YSKTLHSRPSTRCQTDNKTLNNYIHQF*A*SPCTRISVRNNGHIF--TYTQHVPTIGKIR 270
           Y+ TLH  P+T  +  N+  NN I       P ++ +  N GH F     +H P   K+R
Sbjct: 200 YNYTLHYEPNTTSKHKNRQRNNIIWYN---PPFSKNTSTNIGHRFLSLIDKHFPKDHKLR 256

Query: 271 AKHT 282
              T
Sbjct: 257 KTST 260


>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
          Length = 2114

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 585  RKGRREKKKMKSEQDEAEREKEKAEN 508
            +K +++KKK + EQ+E ER +++  N
Sbjct: 1943 KKTKKKKKKEEEEQEEDERRRKEIHN 1968


>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 950

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 573 REKKKMKSEQDEAEREKEKAEN 508
           +EKKK   ++DE E E E+ EN
Sbjct: 892 KEKKKKSGKEDEDEEEDEEEEN 913


>SB_5058| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAE 511
           K RRE+++ + E++E E EKE+ E
Sbjct: 401 KRRREEEEEEEEEEEEEEEKEEEE 424


>SB_38071| Best HMM Match : ABC_membrane (HMM E-Value=1.2e-11)
          Length = 1214

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 113 CKVLLYNNIRCS--SSNVLYDCDCYCTVNLFLILSCEM 6
           C V+LY  + C   S  VL  C   C V L+ ++SC +
Sbjct: 294 CLVVLYRVVSCRVVSCRVLSCCIVSCLVVLYRVVSCRV 331


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,000,139
Number of Sequences: 59808
Number of extensions: 347374
Number of successful extensions: 1317
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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