Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0451.Seq
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    31   1.5  
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    28   8.2  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    28   8.2  

>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +2

Query: 119 VPAHGARPITKH*IITYINSERNPHVHGYQYETTDTYLLTHNMSLQSVKFEPNTRTVLKT 298
           VP H   P T H  ++Y +   +PH H + +E  D+Y+      LQS+   P+   + + 
Sbjct: 323 VPPHH-HPYTVHHPVSYAHPHGHPHAHPHPHEHFDSYI----SKLQSLCVPPDVYALPED 377

Query: 299 NDNSI 313
            D  +
Sbjct: 378 ADRPV 382


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAENL 505
           K +  ++K+K E +E +REKE+ E L
Sbjct: 67  KEKEREEKLKRETEERQREKEREEKL 92


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 582 KGRREKKKMKSEQDEAEREKEKAENL 505
           K +  ++K+K E +E +REKE+ E L
Sbjct: 670 KEKEREEKLKRETEERQREKEREEKL 695


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,631,173
Number of Sequences: 53049
Number of extensions: 481688
Number of successful extensions: 2079
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)