Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0449.Seq
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 TFIWVIKSPFYLXLAAXIXY 388
           TFIWV    F + L+  + Y
Sbjct: 224 TFIWVFNDVFVMLLSTALAY 243


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 TFIWVIKSPFYLXLAAXIXY 388
           TFIWV    F + L+  + Y
Sbjct: 224 TFIWVFNDVFVMLLSTALAY 243


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 447 TFIWVIKSPFYLXLAAXIXY 388
           TFIWV    F + L+  + Y
Sbjct: 224 TFIWVFNDVFVMLLSTALAY 243


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 53  YFKHSFIDFPPHF 15
           YF  +FI FP HF
Sbjct: 300 YFCRAFIIFPTHF 312


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/17 (47%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -3

Query: 390 YCQSIXNXFH-TIFFMV 343
           YCQ + N FH T+  M+
Sbjct: 141 YCQFLYNCFHSTLLLMI 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,252
Number of Sequences: 336
Number of extensions: 1870
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)