Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0448.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot...    29   6.3  
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot...    29   6.3  
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot...    29   6.3  
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA...    28   8.4  

>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
           protein.
          Length = 1396

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 228 WVDELTAHLC*VVTGAHGHLQRKCATHLEI*VLRSHSYNGCPIL 359
           W+    A    ++  AH HLQ KC    E+  L   ++NG P L
Sbjct: 35  WMYPSVAQRLLILIFAHEHLQWKCVAEFEL-CLEEIAFNGTPSL 77


>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
           protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 228 WVDELTAHLC*VVTGAHGHLQRKCATHLEI*VLRSHSYNGCPIL 359
           W+    A    ++  AH HLQ KC    E+  L   ++NG P L
Sbjct: 35  WMYPSVAQRLLILIFAHEHLQWKCVAEFEL-CLEEIAFNGTPSL 77


>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
           protein.
          Length = 1659

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 228 WVDELTAHLC*VVTGAHGHLQRKCATHLEI*VLRSHSYNGCPIL 359
           W+    A    ++  AH HLQ KC    E+  L   ++NG P L
Sbjct: 257 WMYPSVAQRLLILIFAHEHLQWKCVAEFEL-CLEEIAFNGTPSL 299


>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
           protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 228 WVDELTAHLC*VVTGAHGHLQRKCATHLEI*VLRSHSYNGCPIL 359
           W+    A    ++  AH HLQ KC    E+  L   ++NG P L
Sbjct: 219 WMYPSVAQRFLILIFAHEHLQWKCVAEFEL-CLEEIAFNGTPSL 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,503,336
Number of Sequences: 53049
Number of extensions: 583904
Number of successful extensions: 1268
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)