Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0445.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           27   0.40 
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   0.93 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   0.93 
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   1.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   3.8  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   5.0  

>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 103 PQSPSATSVGSGSRSPTKASAGPRTASGST 192
           P   + T+V  G  + T  ++GP T +GST
Sbjct: 61  PGQTTTTTVAPGQTTTTTVASGPVTTTGST 90


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 156 FCG*STPRSYRGSTRRLRHFYSNVVKLYF 70
           +CG +   +  G  R  RHF++ V+++ F
Sbjct: 441 YCGGAGCETRPGRLRGFRHFFAKVIRMLF 469


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +1

Query: 106  QSPSATSVGSGSRSPTKAS----AGPRTASGSTVRQR 204
            +S S +  GSGSRS +++     AG R  SGS  R R
Sbjct: 1064 RSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSR 1100



 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 109  SPSATSVGSGSRSPTKASAGPRTASGSTVRQR 204
            S + +  GSGSRS +++ +  R+ SGS    R
Sbjct: 1085 SRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSR 1116


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 115 SATSVGSGSRSPTKASAGPRTASGST 192
           + T+V  G  + T  ++GP T +GST
Sbjct: 55  TTTTVAPGQTTTTTVASGPVTTTGST 80


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 106 QSPSATSVGSGSRSPTKASAGPRTASGSTVRQ 201
           QS SAT  GS + + T++   P  ASGS  +Q
Sbjct: 439 QSGSATWSGSNTLNYTQSIQPPAHASGSHQQQ 470


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = -2

Query: 163 QKLLWVIYSQILQR*HSEIEAFLFKRC 83
           + + W+++ + ++  H ++E F   RC
Sbjct: 207 ESVTWILFKEPIEVSHEQLELFREMRC 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,445
Number of Sequences: 2352
Number of extensions: 6278
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)