Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0445.Seq
(449 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p pro... 53 2e-07
AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta pr... 53 2e-07
AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-P... 53 2e-07
AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p pro... 30 1.7
AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA ... 30 1.7
AY069593-1|AAL39738.1| 1427|Drosophila melanogaster LD34192p pro... 29 2.2
AE014298-662|AAF45974.2| 1427|Drosophila melanogaster CG2984-PA ... 29 2.2
AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p pro... 29 3.8
AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-P... 29 3.8
AY094906-1|AAM11259.1| 383|Drosophila melanogaster RH12404p pro... 28 6.7
AE014298-1745|AAF48135.2| 383|Drosophila melanogaster CG1488-PA... 28 6.7
AE014298-1744|AAN09641.1| 483|Drosophila melanogaster CG1488-PB... 28 6.7
>AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p
protein.
Length = 100
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +3
Query: 255 SGGMWRFYXDDSXXXXXXXXXXXXXXXXXIASVFMLHIWGKYXRA 389
+GGMWRFY DDS IASVFMLHIWGKY R+
Sbjct: 56 TGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Frame = +1
Query: 100 MPQSPSATSVGSGSRSPTKASAGPRTA---SGSTVRQRK 207
MP S+TSVGSGSRSP+K SA PR+A GST++QRK
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSAGSGGGSTLKQRK 38
>AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta
protein protein.
Length = 100
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +3
Query: 255 SGGMWRFYXDDSXXXXXXXXXXXXXXXXXIASVFMLHIWGKYXRA 389
+GGMWRFY DDS IASVFMLHIWGKY R+
Sbjct: 56 TGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Frame = +1
Query: 100 MPQSPSATSVGSGSRSPTKASAGPRTA---SGSTVRQRK 207
MP S+TSVGSGSRSP+K SA PR+A GST++QRK
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSAGSGGGSTLKQRK 38
>AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-PA
protein.
Length = 100
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/45 (53%), Positives = 26/45 (57%)
Frame = +3
Query: 255 SGGMWRFYXDDSXXXXXXXXXXXXXXXXXIASVFMLHIWGKYXRA 389
+GGMWRFY DDS IASVFMLHIWGKY R+
Sbjct: 56 TGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 3/39 (7%)
Frame = +1
Query: 100 MPQSPSATSVGSGSRSPTKASAGPRTA---SGSTVRQRK 207
MP S+TSVGSGSRSP+K SA PR+A GST++QRK
Sbjct: 1 MPAPASSTSVGSGSRSPSKLSA-PRSAGSGGGSTLKQRK 38
>AY070561-1|AAL48032.1| 538|Drosophila melanogaster LD37523p
protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 106 QSPSATSVGSGSRSPTKASAGPRTASGST 192
+S S + GSGSRSP+++ +G + SGS+
Sbjct: 503 RSRSGSRSGSGSRSPSRSRSGSPSGSGSS 531
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 109 SPSATSVGSGSRSPTKASAGPRTASGSTVR 198
S S + GSGSR+ +++ +G R+ SGS R
Sbjct: 433 SSSGSGSGSGSRASSRSKSGSRSGSGSRSR 462
>AE014297-149|AAF52095.1| 538|Drosophila melanogaster CG2503-PA
protein.
Length = 538
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 106 QSPSATSVGSGSRSPTKASAGPRTASGST 192
+S S + GSGSRSP+++ +G + SGS+
Sbjct: 503 RSRSGSRSGSGSRSPSRSRSGSPSGSGSS 531
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 109 SPSATSVGSGSRSPTKASAGPRTASGSTVR 198
S S + GSGSR+ +++ +G R+ SGS R
Sbjct: 433 SSSGSGSGSGSRASSRSKSGSRSGSGSRSR 462
>AY069593-1|AAL39738.1| 1427|Drosophila melanogaster LD34192p protein.
Length = 1427
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/58 (36%), Positives = 25/58 (43%)
Frame = +1
Query: 103 PQSPSATSVGSGSRSPTKASAGPRTASGSTVRQRKXXXXXXXXXXXXXGAGLEECGGS 276
P SP TS GSGSR T AS R R+++ G+GL GGS
Sbjct: 1260 PASPVITSRGSGSR--TTASPARRLKRSHEDREQRMSLRRSTLSGSASGSGLVGTGGS 1315
>AE014298-662|AAF45974.2| 1427|Drosophila melanogaster CG2984-PA
protein.
Length = 1427
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/58 (36%), Positives = 25/58 (43%)
Frame = +1
Query: 103 PQSPSATSVGSGSRSPTKASAGPRTASGSTVRQRKXXXXXXXXXXXXXGAGLEECGGS 276
P SP TS GSGSR T AS R R+++ G+GL GGS
Sbjct: 1260 PASPVITSRGSGSR--TTASPARRLKRSHEDREQRMSLRRSTLSGSASGSGLVGTGGS 1315
>AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p
protein.
Length = 570
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 103 PQSPSATSVGSGSRSPTKASAGPRTASG 186
PQ+P V SG+R PT S+ TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136
>AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-PA
protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 103 PQSPSATSVGSGSRSPTKASAGPRTASG 186
PQ+P V SG+R PT S+ TA+G
Sbjct: 109 PQTPCELKVPSGNRCPTDQSSNHDTATG 136
>AY094906-1|AAM11259.1| 383|Drosophila melanogaster RH12404p
protein.
Length = 383
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 181 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 71
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 118 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 152
>AE014298-1745|AAF48135.2| 383|Drosophila melanogaster CG1488-PA,
isoform A protein.
Length = 383
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 181 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 71
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 118 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 152
>AE014298-1744|AAN09641.1| 483|Drosophila melanogaster CG1488-PB,
isoform B protein.
Length = 483
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 181 WLFVGQQKLLWVIYSQILQR*HSEIEAFLFKRCKTLL 71
W+F Q+ LW + LQ HS++E+ + KR K LL
Sbjct: 218 WIF--QRTQLWRDLDEQLQVIHSQMESVIEKRAKELL 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,926,432
Number of Sequences: 53049
Number of extensions: 272886
Number of successful extensions: 859
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -