Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0442.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 225 2e-59
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 210 7e-55
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 210 7e-55
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 167 4e-42
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 143 1e-34
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 78 5e-15
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 78 5e-15
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 65 3e-11
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 48 4e-06
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 48 4e-06
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 45 4e-05
Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein. 44 6e-05
AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeri... 44 6e-05
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 44 1e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 44 1e-04
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 42 3e-04
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 42 3e-04
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 42 3e-04
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 42 3e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 42 4e-04
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 42 4e-04
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 42 4e-04
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 41 6e-04
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 41 8e-04
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 41 8e-04
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 41 8e-04
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 40 0.001
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 40 0.001
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 40 0.001
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 40 0.001
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 40 0.002
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 39 0.002
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 39 0.002
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 39 0.002
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 39 0.003
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 39 0.003
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 38 0.005
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 38 0.005
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 38 0.005
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 38 0.007
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 37 0.009
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 37 0.009
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 37 0.009
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 37 0.009
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 37 0.009
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 37 0.009
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 37 0.013
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 37 0.013
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 37 0.013
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 37 0.013
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 37 0.013
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 36 0.017
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 36 0.017
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 36 0.017
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 36 0.017
U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alph... 36 0.022
AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeri... 36 0.022
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.029
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 36 0.029
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 36 0.029
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 36 0.029
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 35 0.038
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 35 0.038
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 35 0.038
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 35 0.038
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 35 0.038
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 35 0.038
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 35 0.051
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 35 0.051
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 35 0.051
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 35 0.051
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 35 0.051
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 34 0.067
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 34 0.067
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 34 0.088
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 34 0.088
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.12
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 33 0.15
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 33 0.20
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 31 0.47
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.62
AL132943-8|CAB81985.3| 453|Caenorhabditis elegans Hypothetical ... 31 0.62
AL132943-7|CAC14394.1| 589|Caenorhabditis elegans Hypothetical ... 31 0.62
AF031834-1|AAC13670.1| 589|Caenorhabditis elegans GLY4 protein. 31 0.62
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 30 1.4
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 30 1.4
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 30 1.4
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 29 3.3
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 29 3.3
U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 28 4.4
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 28 4.4
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 27 7.7
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 7.7
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 225 bits (550), Expect = 2e-59
Identities = 102/115 (88%), Positives = 108/115 (93%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREELMRML+EDELRD
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRD 118
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
AVLL+FANKQDLP AMNAAE+TDKLG R+WYIQATCATSGDGLYEGLDWL
Sbjct: 119 AVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWL 173
Score = 118 bits (283), Expect = 4e-27
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MGN+F +LFKGLFGK+EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK
Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 257 L 259
+
Sbjct: 61 I 61
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 210 bits (512), Expect = 7e-55
Identities = 95/115 (82%), Positives = 103/115 (89%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND+ERI E+REEL +ML+EDELRD
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRD 118
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
A LL+FANKQDLPNAM AAE+TDKLG +R WYIQATCAT G GLYEGLDWL
Sbjct: 119 ATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWL 173
Score = 103 bits (247), Expect = 1e-22
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MG ++LF LFGK+++RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK
Sbjct: 1 MGLTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 257 L 259
+
Sbjct: 61 I 61
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 210 bits (512), Expect = 7e-55
Identities = 95/115 (82%), Positives = 103/115 (89%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND+ERI E+REEL +ML+EDELRD
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRD 118
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
A LL+FANKQDLPNAM AAE+TDKLG +R WYIQATCAT G GLYEGLDWL
Sbjct: 119 ATLLVFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWL 173
Score = 103 bits (247), Expect = 1e-22
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MG ++LF LFGK+++RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK
Sbjct: 1 MGLTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 257 L 259
+
Sbjct: 61 I 61
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 167 bits (407), Expect = 4e-42
Identities = 71/115 (61%), Positives = 93/115 (80%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+NI F VWDVGGQDKIRPLWRHY+ TQ LIFV+D+ DR+R+ EAR EL R++++ E+++
Sbjct: 55 KNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKE 114
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
A++L+FANKQDL +AM EI DKLG R RNWY+Q +CA++GDGL+EGL WL
Sbjct: 115 AIILVFANKQDLADAMKPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWL 169
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +2
Query: 110 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKTL 259
+FGKKE+RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YK +
Sbjct: 8 IFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNI 57
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 143 bits (346), Expect = 1e-34
Identities = 68/115 (59%), Positives = 83/115 (72%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
Q I+ TVWDVGGQ KIR LW++YF NT L+FVVDS+D ERI EA+EEL +L+E EL D
Sbjct: 59 QKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELAD 118
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
+ LL+FANKQD+PNA + AE+T L R W+I T A SG GLYEGL W+
Sbjct: 119 SHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWV 173
Score = 78.2 bits (184), Expect = 4e-15
Identities = 38/63 (60%), Positives = 45/63 (71%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MG F+ + +F E R LM+GLD AGKTTILYKLKL E V TIPTIGFNVETV ++
Sbjct: 1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQK 60
Query: 257 LVL 265
+ L
Sbjct: 61 ITL 63
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 120 bits (288), Expect = 1e-27
Identities = 55/115 (47%), Positives = 73/115 (63%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DR+R+G +R+EL ML EDEL+
Sbjct: 58 KNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQG 117
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
AVL + ANKQD+ + E+ LG R I T A+ G+GL +DWL
Sbjct: 118 AVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWL 172
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/61 (70%), Positives = 53/61 (86%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MG + + F+GLFG +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVE VEYK
Sbjct: 1 MGGVMS-YFRGLFGAREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKN 59
Query: 257 L 259
L
Sbjct: 60 L 60
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 116 bits (280), Expect = 1e-26
Identities = 53/114 (46%), Positives = 73/114 (64%)
Frame = +1
Query: 253 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 432
+I VWD+GGQ IRP W +Y++N LIFV+DSND++R E EL +L E++LR
Sbjct: 61 DIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKV 120
Query: 433 VLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
+LIFANKQDL A ++ EIT KL R W+IQA A +G+ +G+ W+
Sbjct: 121 PVLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWV 174
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 101 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 244
FK G+ E+RIL++GLD AGKTTIL +L ++ PT GFNV+TV
Sbjct: 10 FKSPSGR-EIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTV 56
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 113 bits (271), Expect = 1e-25
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N+ F +WD+GGQ+ +R W Y+ T +I V+DS+D RI +E+L ML ++L
Sbjct: 59 RNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLAR 118
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLG-RIRCATRNWYIQATCATSGDGLYEGLDWL 594
A +L+ ANKQDLP AMN AE++ +LG + R W I CA G+GL E L+W+
Sbjct: 119 AHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWI 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKT 256
MG + A LF+ + K+ +I++VGLD AGKTTILY + V T PTIG NVE V Y+
Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRN 60
Query: 257 L 259
L
Sbjct: 61 L 61
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 109 bits (263), Expect = 1e-24
Identities = 49/115 (42%), Positives = 72/115 (62%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
++ +WDVGGQ +R W++YF++T LI+VVDS+DRER+ + EEL ++L E+ L
Sbjct: 58 KDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAG 117
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
A LL+ ANK DLP A++ I L + +W I + CA SGD L + + WL
Sbjct: 118 ASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWL 172
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKTLVL 265
++EMRIL++GLD AGKTT++ K L E TI PT+GF+++TV +K L
Sbjct: 14 EREMRILILGLDNAGKTTLMKKF-LDEPTDTIEPTLGFDIKTVHFKDFQL 62
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 99 bits (238), Expect = 1e-21
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL-- 423
QN+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ ++ELM ++ ++
Sbjct: 61 QNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVS 120
Query: 424 RDAVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
R ++I ANK D+P AM A++IT LG + W I +TCA +GDGL + + L
Sbjct: 121 RGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQL 177
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +2
Query: 116 GKKEMRILMVGLDAAGKTTILYKLKLGEIVT--TIPTIGFNVETVEYKTL 259
GKK++ I++VGLD +GKTTIL +LK E + +PT+G V + L
Sbjct: 14 GKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNL 63
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 77.8 bits (183), Expect = 5e-15
Identities = 31/114 (27%), Positives = 62/114 (54%)
Frame = +1
Query: 253 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 432
N++ +WD+GGQ + R +W Y + ++F+VD+ D E++ +R ELM++L + +L
Sbjct: 64 NVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAI 123
Query: 433 VLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
+L+ NK+DLP A++ ++ +++ R + + + L WL
Sbjct: 124 PVLVLGNKKDLPGALDERQLIERMNLSSIQNREICCYSISCKEKENIDITLQWL 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETV 244
M N + + LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ +
Sbjct: 4 MVNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKI 60
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 77.8 bits (183), Expect = 5e-15
Identities = 31/114 (27%), Positives = 62/114 (54%)
Frame = +1
Query: 253 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 432
N++ +WD+GGQ + R +W Y + ++F+VD+ D E++ +R ELM++L + +L
Sbjct: 64 NVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAI 123
Query: 433 VLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLDWL 594
+L+ NK+DLP A++ ++ +++ R + + + L WL
Sbjct: 124 PVLVLGNKKDLPGALDERQLIERMNLSSIQNREICCYSISCKEKENIDITLQWL 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETV 244
M N + + LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ +
Sbjct: 4 MVNKVLDWIRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKI 60
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 435
ISFT +D+GG + R +W+ YF ++F++D D ER+ E+R EL +L ++++
Sbjct: 65 ISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVP 124
Query: 436 LLIFANKQDLPNAMNAAEI 492
+LI NK D P A++ ++
Sbjct: 125 VLILGNKIDKPGALSEDQL 143
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 107 GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 223
GL KK +++ +GLD AGKTT+L+ LK I +PT+
Sbjct: 16 GLANKKG-KLVFLGLDNAGKTTLLHMLKDDRIAQHVPTL 53
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 65.3 bits (152), Expect = 3e-11
Identities = 33/113 (29%), Positives = 59/113 (52%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N WDVGG K+R LW+HY+ N Q + +V+D ER EA +EL R++S+ +
Sbjct: 414 KNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGT 473
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSGDGLYEGLD 588
+++ N++D A+N + L ++ + A +G G+ + +D
Sbjct: 474 CPVIVAVNRKD-GYALN-GHMDALLSQLEALPFQHHFHCCDAATGSGIDQIID 524
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = +2
Query: 125 EMRILMVGLDAAGKTTILYKLKLGEIVTTI---PTIGFNVETVEYK 253
E R++++GLD AGKT+I+ +LK ++ T + PTIGFN+ET+ YK
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYK 414
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 57.6 bits (133), Expect = 6e-09
Identities = 23/86 (26%), Positives = 46/86 (53%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
G+ + N WD+GGQ+ +R LW Y+ + +IFVVD+ + + +++
Sbjct: 62 GNVELNNTCLHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMAN 121
Query: 415 DELRDAVLLIFANKQDLPNAMNAAEI 492
+ +++ +L+ NK ++ A AAE+
Sbjct: 122 EIVQNIPVLVAVNKSEMEGAAAAAEV 147
Score = 34.7 bits (76), Expect = 0.051
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 77 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 190
M + A +++ F KK+ +++VGLD AGKTT L + K
Sbjct: 1 MYTLSAGIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTK 38
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ T++DVGG IR +W +Y+ G+I+V+D + E E+ E L + S ++
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQK 126
Query: 430 AVLLIFANKQD 462
+ + N Q+
Sbjct: 127 KPIFLLLNNQN 137
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 119 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 250
++E+++ G+ +AGKTT L LK + + T GF+ +EY
Sbjct: 22 RREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEY 65
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ T++DVGG IR +W +Y+ G+I+V+D + E E+ E L + S ++
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQK 126
Query: 430 AVLLIFANKQD 462
+ + N Q+
Sbjct: 127 KPIFLLLNNQN 137
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 119 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 250
++E+++ G+ +AGKTT L LK + + T GF+ +EY
Sbjct: 22 RREIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEY 65
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERIGEAREELMRMLSEDELR 426
+ +WD GQ++ R L Y++ QG+I V D R E++ +E+ + D +
Sbjct: 60 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNI- 118
Query: 427 DAVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCAT 558
+ ++ ANK D+PN + E K + R +I+A+ T
Sbjct: 119 --IKMMVANKIDMPNRVVTREEGLKFAK---RHRTLFIEASAKT 157
>Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical
protein C34D1.3 protein.
Length = 356
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein.
Length = 350
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein.
Length = 342
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+I+ + F V+DVGGQ R W H F N + +IF+ ++ +++ E RM+ +L
Sbjct: 192 KIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFITAISEYDQVLFEDETTNRMIESMQL 251
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 252 FNSICNSTWFLSTAMILFMNKKDL 275
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
R Q + +WD GQ++ R L +F++ G I + D + + R+ L ++
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYC 120
Query: 424 RDAVLLIFANKQDLPN-----AMNAAEITDKLG 507
++I NK DL N A ++ D+LG
Sbjct: 121 EQPDIIICGNKADLENRRQVSTARAKQLADQLG 153
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
R Q + +WD GQ++ R L +F++ G I + D + + R+ L ++
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYC 120
Query: 424 RDAVLLIFANKQDLPN-----AMNAAEITDKLG 507
++I NK DL N A ++ D+LG
Sbjct: 121 EQPDIIICGNKADLENRRQVSTARAKQLADQLG 153
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N++F ++DVGGQ R W H F++ +IF V ++ +++ E RM +L D
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMHESLKLFD 252
Query: 430 AV----------LLIFANKQDL 465
++ +++F NK+DL
Sbjct: 253 SICNNKWFTDTSIILFLNKKDL 274
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 435
+ VWD GQ++ R + Y +N + V D DR + + L + DA
Sbjct: 105 VRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDAN 164
Query: 436 LLIFANKQDLPNAMNAAEITDKLGRIRCATRN 531
+ + NK DL + E+T+ G+ A N
Sbjct: 165 VYLIGNKTDL---VEKREVTEAEGKAMAAKIN 193
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N++F ++DVGGQ R W H F++ +IF V ++ +++ E RM +L D
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMHESLKLFD 252
Query: 430 AV----------LLIFANKQDL 465
++ +++F NK+DL
Sbjct: 253 SICNNKWFTDTSIILFLNKKDL 274
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ R + Y++ G+I V D + ER E + +R + E D
Sbjct: 55 KKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITN-ERSFENIKNWIRNIEEHAASD 113
Query: 430 AVLLIFANKQDL 465
+I NK D+
Sbjct: 114 VERMIIGNKCDI 125
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ R + Y++ G+I V D + ER E + +R + E D
Sbjct: 55 KKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITN-ERSFENIKNWIRNIEEHAASD 113
Query: 430 AVLLIFANKQDL 465
+I NK D+
Sbjct: 114 VERMIIGNKCDI 125
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N++F ++DVGGQ R W H F++ +IF V ++ +++ E RM +L D
Sbjct: 193 KNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQLLHEDETTNRMHESLKLFD 252
Query: 430 AV----------LLIFANKQDL 465
++ +++F NK+DL
Sbjct: 253 SICNNKWFTDTSIILFLNKKDL 274
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+N++ +WD GQ++ R L + YF+ G I V D + R + + + E R
Sbjct: 508 RNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVR-DWIETIKESTERS 566
Query: 430 AVLLIFANKQDL 465
+++ NK D+
Sbjct: 567 IPIILVGNKVDM 578
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+++++ F V+DVGGQ R W H F++ +IF+ ++ +++ E RM+ L
Sbjct: 191 QMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQVLFEDETTNRMIESMRL 250
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 251 FESICNSRWFINTSMILFLNKKDL 274
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+++++ F V+DVGGQ R W H F++ +IF+ ++ +++ E RM+ L
Sbjct: 191 QMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQVLFEDETTNRMIESMRL 250
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 251 FESICNSRWFINTSMILFLNKKDL 274
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ R + Y++ G+I V D D+E ++ L + +
Sbjct: 58 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQE-IDRYACEN 116
Query: 430 AVLLIFANKQDLPNAMNAAE 489
L+ NK DL A A E
Sbjct: 117 VNKLLVGNKCDL-TAKRAVE 135
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 426
I+ + F V+DVGGQ R W H F++ +IF+ ++ + E RM+ L
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLF 253
Query: 427 DAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 254 ESICNSRWFHNTNIILFLNKKDL 276
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 426
I+ + F V+DVGGQ R W H F++ +IF+ ++ + E RM+ L
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLF 253
Query: 427 DAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 254 ESICNSRWFHNTNIILFLNKKDL 276
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 426
I+ + F V+DVGGQ R W H F++ +IF+ ++ + E RM+ L
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLF 253
Query: 427 DAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 254 ESICNSRWFHNTNIILFLNKKDL 276
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ R + Y++ G+I V D + ER E + +R + E D
Sbjct: 55 KKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITN-ERSFENIKNWIRNIEEHAASD 113
Query: 430 AVLLIFANK 456
+I NK
Sbjct: 114 VERMIIGNK 122
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Frame = +1
Query: 244 RIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL 423
+++++ F V DVGGQ R W H F++ +IF+ ++ +++ E RM+ L
Sbjct: 191 QMKSVDFRVLDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQVLFEDETTNRMIESMRL 250
Query: 424 RDAV----------LLIFANKQDL 465
+++ +++F NK+DL
Sbjct: 251 FESICNSRWFINTSMILFLNKKDL 274
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 435
I F +WD GQ++ L Y++ Q I V D ++E +A+ ++ L + V
Sbjct: 68 IKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAK-NWVKELQRQASPNIV 126
Query: 436 LLIFANKQDLPN 471
+ + NK D+ N
Sbjct: 127 MALAGNKADVAN 138
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GQ++ R + Y+++ L+ V D +R R L ++ +
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAV 109
Query: 430 AVLLIFANKQDLPNAMNAAE 489
V L+ NK DLP A+ E
Sbjct: 110 QVTLV-GNKCDLPRAVPTDE 128
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GQ++ R + Y+++ L+ V D +R R L ++ +
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAV 109
Query: 430 AVLLIFANKQDLPNAMNAAE 489
V L+ NK DLP A+ E
Sbjct: 110 QVTLV-GNKCDLPRAVPTDE 128
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
Q I +WD GQ++ R + R Y++ G + V D R L S
Sbjct: 58 QKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNT 117
Query: 430 AVLLIFANKQDL 465
A+ LI NK DL
Sbjct: 118 AIFLI-GNKADL 128
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 405
Q + +WD GQ++ R + Y++ T G++ V D + E G + L +
Sbjct: 57 QRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEI 108
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE----------RIGEAREELM 399
+ + F + DVGGQ R W H F N ++F+V +D + R+ ++ E
Sbjct: 203 KKMDFKMVDVGGQRSERRKWIHCFDNVDMILFIVSMSDYDQLDPEDNKYNRMKQSYEIFK 262
Query: 400 RMLSEDELRDAVLLIFANKQDL 465
++ D R A +++F NK D+
Sbjct: 263 TIVHSDLFRHASIVLFLNKYDV 284
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ + Y++ G++ V D + + + L R + E D
Sbjct: 56 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWL-RNIDEHASED 114
Query: 430 AVLLIFANKQDL 465
V +I NK D+
Sbjct: 115 VVKMILGNKCDM 126
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 131 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK 253
++L++G GKT ILY+ TT I TIG F ++T+E K
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK 54
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE----------RIGEAREELM 399
+ + F + DVGGQ R W H F N ++F+V +D + R+ ++ E
Sbjct: 203 KKMDFKMVDVGGQRSERRKWIHCFDNVDMILFIVSMSDYDQLDPEDNKYNRMKQSYEIFK 262
Query: 400 RMLSEDELRDAVLLIFANKQDL 465
++ D R A +++F NK D+
Sbjct: 263 TIVHSDLFRHASIVLFLNKYDV 284
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERIGEAREELMRMLSEDELR 426
+ +WD GQ++ R L Y++ QG+I V D R E++ +E+ + D +
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNI- 91
Query: 427 DAVLLIFANKQDL 465
+ ++ ANK D+
Sbjct: 92 --IKMMVANKIDM 102
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 435
+ VWD GQ+ R + R Y++N G + V D R+ E+ + L + + V
Sbjct: 55 VRLRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHL-EQWLSDLRQHGHPEMV 113
Query: 436 LLIFANKQDL 465
+++ NK DL
Sbjct: 114 IMLIGNKSDL 123
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 375
++N +F ++DVGGQ R W H F + Q ++F+ ++ +++
Sbjct: 202 LKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEYDQV 244
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 38.7 bits (86), Expect = 0.003
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 369
+ +WD GQ+K R + + Y++N+ G++ + D+ +RE
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRE 104
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 375
++N +F ++DVGGQ R W H F + Q ++F+ ++ +++
Sbjct: 202 LKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEYDQV 244
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA----REELMRMLSEDEL 423
+ +WD+ GQD+ + R Y+++ I V+DS RER E + +L + ++ +
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDST-RERTIEGALRWKTDLDQKVTLADG 119
Query: 424 RDAVLLIFANKQDLPNAMNAAEITD 498
++ ANK D+ N + ++ D
Sbjct: 120 SPVPAILLANKCDIDNKLGDDKLYD 144
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ+ R + R Y++ G + V D R+ L + +
Sbjct: 53 KQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWL-EDARQHSNSN 111
Query: 430 AVLLIFANKQDL 465
V+++ NK DL
Sbjct: 112 MVIMLIGNKSDL 123
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA----REELMRMLSEDEL 423
+ +WD+ GQD+ + R Y+++ I V+DS RER E + +L + ++ +
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDST-RERTIEGALRWKTDLDQKVTLADG 119
Query: 424 RDAVLLIFANKQDLPNAMNAAEITD 498
++ ANK D+ N + ++ D
Sbjct: 120 SPVPAILLANKCDIDNKLGDDKLYD 144
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GGQ++ R + + Y+++ G++ D ++ G + + + +S+ +
Sbjct: 57 KRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFG-SLQRWIDDVSKFAAPN 115
Query: 430 AVLLIFANKQDL 465
V L+ K DL
Sbjct: 116 VVKLLIGTKCDL 127
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + VWD GQ++ R L Y+++ G + V D RE E + L D
Sbjct: 53 KKVKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHL-EHWLTDLQRLGDPD 111
Query: 430 AVLLIFANKQDL 465
V+++ NK DL
Sbjct: 112 IVIVLIGNKSDL 123
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ + Y++ G++ V D + + + L R + E D
Sbjct: 56 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWL-RNIDEHASED 114
Query: 430 AVLLIFANK 456
V +I NK
Sbjct: 115 VVKMILGNK 123
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 131 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK 253
++L++G GKT ILY+ TT I TIG F ++T+E K
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK 54
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREEL 396
++ I F + DVGGQ R W H F+N ++F +V+ ++ R+ E++
Sbjct: 192 LEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECDNENRMEESKALF 251
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ ++ +++F NK+DL
Sbjct: 252 RTIITYPWFTNSSVILFLNKKDL 274
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREEL 396
++ I F + DVGGQ R W H F+N ++F +V+ ++ R+ E++
Sbjct: 192 LEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECDNENRMEESKALF 251
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ ++ +++F NK+DL
Sbjct: 252 RTIITYPWFTNSSVILFLNKKDL 274
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREEL 396
++ I F + DVGGQ R W H F+N ++F +V+ ++ R+ E++
Sbjct: 140 LEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECDNENRMEESKALF 199
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ ++ +++F NK+DL
Sbjct: 200 RTIITYPWFTNSSVILFLNKKDL 222
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREEL 396
++ I F + DVGGQ R W H F+N ++F +V+ ++ R+ E++
Sbjct: 192 LEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECDNENRMEESKALF 251
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ ++ +++F NK+DL
Sbjct: 252 RTIITYPWFTNSSVILFLNKKDL 274
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
++ ++F V DVGGQ R W H F N +IF+ + N R+ E+ +
Sbjct: 190 LKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFISSLSEYDQTLREDNCTNRMQESLKLF 249
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + D ++F NK+DL
Sbjct: 250 DSICNSPWFADIHFILFLNKKDL 272
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 268 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 447
+WD GQ+K L Y++ + G++ V D DR+ + + ++ + A +LI
Sbjct: 65 IWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLE-IKTCLGNTAEILIV 123
Query: 448 ANKQDL 465
NK DL
Sbjct: 124 GNKIDL 129
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRERIGEAREELMR 402
+S + DVGGQ R W H F + + ++FV+D + +R E+R EL R
Sbjct: 195 VSLLMIDVGGQRSERKKWLHLFDDAKVVLFVIDLTGYAKRSEESRMELSR 244
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRERIGEAREELMR 402
+S + DVGGQ R W H F + + ++FV+D + +R E+R EL R
Sbjct: 235 VSLLMIDVGGQRSERKKWLHLFDDAKVVLFVIDLTGYAKRSEESRMELSR 284
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRERIGEAREELMR 402
+S + DVGGQ R W H F + + ++FV+D + +R E+R EL R
Sbjct: 195 VSLLMIDVGGQRSERKKWLHLFDDAKVVLFVIDLTGYAKRSEESRMELSR 244
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
++ ++F V DVGGQ R W H F N +IF+ + N R+ E+ +
Sbjct: 190 LKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFISSLSEYDQTLREDNCTNRMQESLKLF 249
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + D ++F NK+DL
Sbjct: 250 DSICNSPWFADIHFILFLNKKDL 272
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND----------RERIGEAREEL 396
I+ F ++DVGGQ R W H F N IF+ N+ R+ E+ +
Sbjct: 193 IKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFISAINEFNQKLNEDGQTNRMKESIKLF 252
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + A +++F NK+DL
Sbjct: 253 ETICNSRWFVQAAMILFLNKRDL 275
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 36.3 bits (80), Expect = 0.017
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 262 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV-- 435
F V+DVGGQ R W H F++ LIF V ++ + + + RM +L D++
Sbjct: 196 FLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMVLVEDCQTNRMRESLKLFDSICN 255
Query: 436 --------LLIFANKQDL 465
+++F NK+DL
Sbjct: 256 NKWFVETSIILFLNKKDL 273
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 36.3 bits (80), Expect = 0.017
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND----------RERIGEAREEL 396
I+ F ++DVGGQ R W H F N IF+ N+ R+ E+ +
Sbjct: 193 IKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFISAINEFNQKLNEDGQTNRMKESIKLF 252
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + A +++F NK+DL
Sbjct: 253 ETICNSRWFVQAAMILFLNKRDL 275
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 36.3 bits (80), Expect = 0.017
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 262 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV-- 435
F V+DVGGQ R W H F++ LIF V ++ + + + RM +L D++
Sbjct: 196 FLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMVLVEDCQTNRMRESLKLFDSICN 255
Query: 436 --------LLIFANKQDL 465
+++F NK+DL
Sbjct: 256 NKWFVETSIILFLNKKDL 273
>U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alpha
subunit protein 12 protein.
Length = 355
Score = 35.9 bits (79), Expect = 0.022
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSN--------DR--ERIGEAREEL 396
I I F DVGGQ R W F + ++F+V SN DR R+ E+R
Sbjct: 192 INKIPFRFIDVGGQRSQRQKWFQCFTDITSILFMVASNEYDQVILEDRRTNRVVESRSVF 251
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ + +++F NK DL
Sbjct: 252 ETIVNNRAFSNVSIILFMNKNDL 274
>AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 35.9 bits (79), Expect = 0.022
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSN--------DR--ERIGEAREEL 396
I I F DVGGQ R W F + ++F+V SN DR R+ E+R
Sbjct: 192 INKIPFRFIDVGGQRSQRQKWFQCFTDITSILFMVASNEYDQVILEDRRTNRVVESRSVF 251
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+++ + +++F NK DL
Sbjct: 252 ETIVNNRAFSNVSIILFMNKNDL 274
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 262 FTVWDVGGQDKIRPLWRHYFQNTQGLIFV----------VDSNDRERIGEAREELMRMLS 411
F V+DVGGQ R W H F + + +I+V ++ N R+ E+ + ++++
Sbjct: 197 FRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQVLLEDNTTNRMHESIQLFKQVIN 256
Query: 412 EDELRDAVLLIFANKQDL 465
+ +++F NK DL
Sbjct: 257 NKYFVNTSVILFLNKIDL 274
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 262 FTVWDVGGQDKIRPLWRHYFQNTQGLIFV----------VDSNDRERIGEAREELMRMLS 411
F V+DVGGQ R W H F + + +I+V ++ N R+ E+ + ++++
Sbjct: 197 FRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQVLLEDNTTNRMHESIQLFKQVIN 256
Query: 412 EDELRDAVLLIFANKQDL 465
+ +++F NK DL
Sbjct: 257 NKYFVNTSVILFLNKIDL 274
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Frame = +1
Query: 262 FTVWDVGGQDKIRPLWRHYFQNTQGLIFV----------VDSNDRERIGEAREELMRMLS 411
F V+DVGGQ R W H F + + +I+V ++ N R+ E+ + ++++
Sbjct: 197 FRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQVLLEDNTTNRMHESIQLFKQVIN 256
Query: 412 EDELRDAVLLIFANKQDL 465
+ +++F NK DL
Sbjct: 257 NKYFVNTSVILFLNKIDL 274
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE--ELMRMLSEDELRD 429
I+ +WD GQ++ R + + YF+ G++ + D + R + +R +D
Sbjct: 252 IAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDA--- 308
Query: 430 AVLLIFANKQDL 465
V+ + NK DL
Sbjct: 309 TVMCLVGNKMDL 320
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
GD R++ +WD GQ++ R + Y++ G I + D + E ++ +
Sbjct: 67 GDKRVK---LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKT 122
Query: 415 DELRDAVLLIFANKQDL 465
+A +++ NK D+
Sbjct: 123 YSWENAQVVLVGNKCDM 139
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
GD R++ +WD GQ++ R + Y++ G I + D + E ++ +
Sbjct: 67 GDKRVK---LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKT 122
Query: 415 DELRDAVLLIFANKQDL 465
+A +++ NK D+
Sbjct: 123 YSWENAQVVLVGNKCDM 139
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
GD R++ +WD GQ++ R + Y++ G I + D + E ++ +
Sbjct: 67 GDKRVK---LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKT 122
Query: 415 DELRDAVLLIFANKQDL 465
+A +++ NK D+
Sbjct: 123 YSWENAQVVLVGNKCDM 139
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
GD R++ +WD GQ++ R + Y++ G I + D + E ++ +
Sbjct: 81 GDKRVK---LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKT 136
Query: 415 DELRDAVLLIFANKQDL 465
+A +++ NK D+
Sbjct: 137 YSWENAQVVLVGNKCDM 153
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
Q+I +WD GQ++ R L Y ++ + + V+D +D E E ++ +++
Sbjct: 54 QSIRLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSD-ENCVEHLIRWKGIIDKNKSDF 112
Query: 430 AVLLIFANKQDLPNAMNAAEIT 495
+I NK DL + + +T
Sbjct: 113 TSTIIVGNKHDLVSEKRSPRLT 134
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +1
Query: 235 GDSRIQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 414
GD R++ +WD GQ++ R + Y++ G I + D + E ++ +
Sbjct: 67 GDKRVK---LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKT 122
Query: 415 DELRDAVLLIFANKQDL 465
+A +++ NK D+
Sbjct: 123 YSWENAQVVLVGNKCDM 139
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
+ + F ++DVGGQ R W F + +IFV + N + R+ E+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLVLWEDNTQNRLRESLALF 254
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + L+ +++F NKQDL
Sbjct: 255 KNIWNNRWLKTISVILFLNKQDL 277
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
+ + F ++DVGGQ R W F + +IFV + N + R+ E+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLVLWEDNTQNRLRESLALF 254
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + L+ +++F NKQDL
Sbjct: 255 KNIWNNRWLKTISVILFLNKQDL 277
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GQ++ R + Y++ G + V D + E E ++ L + ++
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI-AKHVTYENVERWLKELRDHADQN 116
Query: 430 AVLLIFANKQDL 465
V+++ NK DL
Sbjct: 117 IVIMLVGNKSDL 128
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
+ + F ++DVGGQ R W F + +IFV + N + R+ E+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLVLWEDNTQNRLRESLALF 254
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + L+ +++F NKQDL
Sbjct: 255 KNIWNNRWLKTISVILFLNKQDL 277
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREEL 396
+ + F ++DVGGQ R W F + +IFV + N + R+ E+
Sbjct: 195 VDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFVCASSSYNLVLWEDNTQNRLRESLALF 254
Query: 397 MRMLSEDELRDAVLLIFANKQDL 465
+ + L+ +++F NKQDL
Sbjct: 255 KNIWNNRWLKTISVILFLNKQDL 277
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.067
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL- 423
+ NI + D GGQ R W H+F ++FV ++ ++ EE RM L
Sbjct: 194 MNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQKLAEDEETNRMHESIRLF 253
Query: 424 ---------RDAVLLIFANKQDL 465
+ A +++F NK DL
Sbjct: 254 WTVFNGKFFKKAAVILFLNKIDL 276
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.067
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Frame = +1
Query: 247 IQNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL- 423
+ NI + D GGQ R W H+F ++FV ++ ++ EE RM L
Sbjct: 194 MNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQKLAEDEETNRMHESIRLF 253
Query: 424 ---------RDAVLLIFANKQDL 465
+ A +++F NK DL
Sbjct: 254 WTVFNGKFFKKAAVILFLNKIDL 276
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.088
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE-RIGEAREELMRMLSEDELR 426
+++ F ++DVGGQ R W H F + +IF V ++ + R+ E + + RM +L
Sbjct: 195 KDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAE-DQTMNRMHESMQLF 253
Query: 427 DAVL 438
D+++
Sbjct: 254 DSIV 257
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 33.9 bits (74), Expect = 0.088
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE-RIGEAREELMRMLSEDELR 426
+++ F ++DVGGQ R W H F + +IF V ++ + R+ E + + RM +L
Sbjct: 195 KDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAE-DQTMNRMHESMQLF 253
Query: 427 DAVL 438
D+++
Sbjct: 254 DSIV 257
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 268 VWDVGGQDKIRP-LWRHYFQNTQGLIFVVDSNDRERIGE 381
+WD GQ++ R + HY++N ++FV D RE +
Sbjct: 153 LWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFND 191
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 WDVGGQDKIRP-LWRHYFQNTQGLIFVVDSNDRERIGE 381
WD GQ++ R + HY++N ++FV D RE +
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFND 38
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 435
I +WD GQ++ R + + Y+++ ++ V D + + + E + + R +
Sbjct: 56 IKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSF-DCLPEWLGEIESYANRRVL 114
Query: 436 LLIFANKQDLPNAMNAAEITDKLGR 510
++ NK D + E+ +++GR
Sbjct: 115 KILVGNKVD---KGDEREVPERIGR 136
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.47
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GQ++ R L Y +++ + V D + + + + + +E D
Sbjct: 57 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTE-RGSD 115
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLGRIRCATRNWYIQATCATSG 564
++++ NK DL + ++T G + N T A +G
Sbjct: 116 VIIMLVGNKTDL---SDKRQVTTDEGERKAKELNVMFIETSAKAG 157
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ I +WD GQ++ R L Y +++ + V D + + + + + +E D
Sbjct: 58 RTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGC-D 116
Query: 430 AVLLIFANKQDL 465
++++ NK DL
Sbjct: 117 VIIVLVGNKTDL 128
>AL132943-8|CAB81985.3| 453|Caenorhabditis elegans Hypothetical
protein Y116F11B.12b protein.
Length = 453
Score = 31.1 bits (67), Expect = 0.62
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWR--HYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+SF VW GG +I P R H F+ F S G ++ R +E + D
Sbjct: 353 MSFRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGS------GNVFQKNTRRAAEVWM-D 405
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLG---RIRCATRNWYIQ 543
I+ +N +ITD+L R++C + WY++
Sbjct: 406 EYKAIYLKNVPSARFVNFGDITDRLAIRDRLQCKSFKWYLE 446
>AL132943-7|CAC14394.1| 589|Caenorhabditis elegans Hypothetical
protein Y116F11B.12a protein.
Length = 589
Score = 31.1 bits (67), Expect = 0.62
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWR--HYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+SF VW GG +I P R H F+ F S G ++ R +E + D
Sbjct: 353 MSFRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGS------GNVFQKNTRRAAEVWM-D 405
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLG---RIRCATRNWYIQ 543
I+ +N +ITD+L R++C + WY++
Sbjct: 406 EYKAIYLKNVPSARFVNFGDITDRLAIRDRLQCKSFKWYLE 446
>AF031834-1|AAC13670.1| 589|Caenorhabditis elegans GLY4 protein.
Length = 589
Score = 31.1 bits (67), Expect = 0.62
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWR--HYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+SF VW GG +I P R H F+ F S G ++ R +E + D
Sbjct: 353 MSFRVWQCGGSLEIMPCSRVGHVFRKKHPYTFPGGS------GNVFQKNTRRAAEVWM-D 405
Query: 430 AVLLIFANKQDLPNAMNAAEITDKLG---RIRCATRNWYIQ 543
I+ +N +ITD+L R++C + WY++
Sbjct: 406 EYKAIYLKNVPSARFVNFGDITDRLAIRDRLQCKSFKWYLE 446
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +1
Query: 250 QNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 429
+ + +WD GQ++ R + Y++ G + V D + E E ++ L + ++
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI-AKHVTYENVERWLKELRDHADQN 116
Query: 430 AVLLIFANKQD 462
V++ NK D
Sbjct: 117 IVIMPVGNKCD 127
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 259 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFV 348
S + DVGGQ + W H F N G++F+
Sbjct: 192 SLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 259 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFV 348
S + DVGGQ + W H F N G++F+
Sbjct: 192 SLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 274 DVGGQDKIRPLWRHYFQNTQGLIFV 348
DVGGQ R W H+F+ ++FV
Sbjct: 199 DVGGQKTERRKWIHFFEGVTAVMFV 223
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 274 DVGGQDKIRPLWRHYFQNTQGLIFV 348
DVGGQ R W H+F+ ++FV
Sbjct: 199 DVGGQKTERRKWIHFFEGVTAVMFV 223
>U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical
protein B0207.8 protein.
Length = 141
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 205 YNFT*FEFVQNCGFTSCIQTNHQYSHFLFAKKAFK*IRKHIPHFEL 68
YNF F ++ NC IQ N ++ + + F +KH +F +
Sbjct: 17 YNFEIFLYLMNCQVLKKIQFNKKHFSEPYTRFLFDIFKKHFSYFAI 62
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = -2
Query: 276 IPHSKTNVLYSTVSTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINILISFLPKRPLNK 97
I H K NV ++ ++ + + I V I N++ + VVL + + + + + L
Sbjct: 228 IKHPKRNVPFALLTGISVVTAIYVAI--NVAYF--VVLDVETVKQSDAVAAIFSRETLGD 283
Query: 96 FANIFPIL 73
FAN+ P L
Sbjct: 284 FANVVPFL 291
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = -2
Query: 276 IPHSKTNVLYSTVSTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINILISFLPKRPLNK 97
I H K NV ++ ++ + + I V I N++ + VVL + + + + + L
Sbjct: 228 IKHPKRNVPFALLTGISVVTAIYVAI--NVAYF--VVLDVETVKQSDAVAAIFSRETLGD 283
Query: 96 FANIFPIL 73
FAN+ P L
Sbjct: 284 FANVVPFL 291
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 256 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 366
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 58 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTAR 94
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 98 LFKGLFGKKEMRILMVGLDAAGKTTILYKL--KLGEIVTTIPTIGFNVE 238
+ K + R+L VGL GKTTI +L K E TT T VE
Sbjct: 29 VLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVE 77
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -2
Query: 246 STVSTLKPIVG----IVVTISPNLSLYRIVVLPAASKPTINILIS 124
STVSTL PIV IV T+SP +S +V + PT++ L S
Sbjct: 2062 STVSTLSPIVSTLSPIVSTLSPIVSTLSPIV--STLSPTVSTLSS 2104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,479,490
Number of Sequences: 27780
Number of extensions: 312701
Number of successful extensions: 1052
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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