Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0440.Seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.9  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   5.1  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         23   6.8  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         23   6.8  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   6.8  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   6.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 101  FKCIHKLKTTQSHKVM 148
            FKC+ K KTT  H+++
Sbjct: 1461 FKCVDKNKTTLPHEII 1476


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 520 NTIQRTRTTVAPKHKKT 470
           +TI RT+ TVAPK   T
Sbjct: 112 HTITRTKATVAPKSTTT 128


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 520 NTIQRTRTTVAPKHKKT 470
           +T+ RT+ TVAPK   T
Sbjct: 112 HTVTRTKATVAPKSTTT 128


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 520 NTIQRTRTTVAPKHKKT 470
           +T+ RT+ TVAPK   T
Sbjct: 112 HTVTRTKATVAPKSTTT 128


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 520 NTIQRTRTTVAPKHKKT 470
           +T+ RT+ TVAPK   T
Sbjct: 112 HTVTRTKATVAPKSTTT 128


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 520 NTIQRTRTTVAPKHKKT 470
           +T+ RT+ TVAPK   T
Sbjct: 112 HTVTRTKATVAPKSTTT 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,084
Number of Sequences: 2352
Number of extensions: 7506
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)