Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0439.Seq
(548 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 28 0.062
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 28 0.062
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 25 0.44
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 4.1
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 5.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 5.4
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 7.1
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 7.1
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 7.1
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 27.9 bits (59), Expect = 0.062
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 329 QADHPRQVQRHHQVAGFQPTGRQGGYEHKQ 240
Q HP+ Q HHQ G+QG H+Q
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQGANMHQQ 201
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 27.9 bits (59), Expect = 0.062
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 329 QADHPRQVQRHHQVAGFQPTGRQGGYEHKQ 240
Q HP+ Q HHQ G+QG H+Q
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQGANMHQQ 203
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 25.0 bits (52), Expect = 0.44
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 542 HQGDQDHHYQR-QGRLSKEEIERMVNEAEKYRXEDDKQ 432
H D + H Q Q +S EE+ MVN D Q
Sbjct: 307 HSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQ 344
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 385 SMKSTMEDEKLKEKISDSD 329
S+ S EDE+++ ++SD D
Sbjct: 18 SLLSKKEDEEVEHRLSDRD 36
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 227 LPILSACAH-ILLVGQLVGIQPLD 295
LP C +LL+ Q+VG+ PL+
Sbjct: 21 LPTTHNCLKKVLLLSQIVGVFPLN 44
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 142 PEPEVPPPGLEALAPPS 92
P P+VPP L + PP+
Sbjct: 176 PLPQVPPLPLPPIFPPT 192
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 332 RVRDLFLELLIL 367
RV+DLFLE ++L
Sbjct: 581 RVKDLFLEAVLL 592
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.0 bits (42), Expect = 7.1
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = -2
Query: 142 PEPEVPPPGLEALAPPSRRSIKPTFHXTRKPTCNNHLVTS 23
P+ E+P P + + S+ PT T P L S
Sbjct: 73 PKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPS 112
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.0 bits (42), Expect = 7.1
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = -2
Query: 100 PPSRRSIKPTFHXTRKPTCNNHL 32
PP I+P +P CN L
Sbjct: 95 PPIHHQIRPPILHDTQPMCNPQL 117
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 437 KQKETIQAKNALESYLLQHEVYH 369
K+K Q + + Y + H VYH
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYH 443
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 514 NDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPS 419
N + + RK+S ++ ++ S S+ RPS
Sbjct: 1408 NPSISAFRKKSLAYVQQRMSIAPNRVSQARPS 1439
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 514 NDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPS 419
N + + RK+S ++ ++ S S+ RPS
Sbjct: 1408 NPSISAFRKKSLAYVQQRMSIAPNRVSQARPS 1439
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,645
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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