Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0439.Seq
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 85 5e-17
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 72 4e-13
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 55 4e-08
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.088
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12) 33 0.20
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 33 0.20
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 33 0.20
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 33 0.20
SB_4914| Best HMM Match : RVT_1 (HMM E-Value=2.5e-16) 33 0.20
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 32 0.27
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_38927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 31 0.82
SB_45583| Best HMM Match : RVT_1 (HMM E-Value=1.4e-05) 31 0.82
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 31 0.82
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 30 1.1
SB_52507| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 1.9
SB_1024| Best HMM Match : Ank (HMM E-Value=0) 29 2.5
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 29 3.3
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11) 29 3.3
SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84) 28 4.4
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 28 4.4
SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) 28 4.4
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 4.4
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 5.8
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 28 5.8
SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 5.8
SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09) 28 5.8
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 5.8
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 27 7.6
SB_30575| Best HMM Match : Pico_P2A (HMM E-Value=5.9) 27 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = -2
Query: 547 STTKETKITITNDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPSRPRMHWNLT--CFSMKS 374
ST KE KITITNDK + + M +++ + +++ R + +L +SMKS
Sbjct: 496 STGKENKITITNDK--GRLSKEDIERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSMKS 553
Query: 373 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRK 236
T+ED+K+K+KIS+ DK+ ILDKC + +KWLD+NQ A+K++ +K
Sbjct: 554 TVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQK 599
Score = 84.6 bits (200), Expect = 5e-17
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHGG*EAQGKDL*L* 330
+GRLSKE+IERMVNEA KY+ ED+KQ++ IQ KN+LESY + + + K +
Sbjct: 509 KGRLSKEDIERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSMKSTVEDDKVKDK---IS 565
Query: 329 QADHPRQVQRHHQVAGF---QPTGRQGGYEHKQKELEGICNPIITKMYQ 192
+ D + + +V + T + +E+ QKELE +CNPIITK+YQ
Sbjct: 566 EEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/104 (35%), Positives = 60/104 (57%)
Frame = -2
Query: 547 STTKETKITITNDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPSRPRMHWNLTCFSMKSTM 368
ST KE KITITNDK ++ + + + R + + FSMKSTM
Sbjct: 588 STGKENKITITNDKGRLSKEDIERMVKEAEKFKAADEAVRERIQSKNSLESYAFSMKSTM 647
Query: 367 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRK 236
EDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+KE++ +K
Sbjct: 648 EDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQK 691
Score = 75.4 bits (177), Expect = 3e-14
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHGG*EAQGKDL*L* 330
+GRLSKE+IERMV EAEK++ D+ +E IQ+KN+LESY + + + K L
Sbjct: 601 KGRLSKEDIERMVKEAEKFKAADEAVRERIQSKNSLESYAFSMKSTMEDEKVKDK---LS 657
Query: 329 QADHPRQVQRHHQVAGFQPTGRQGGYEH---KQKELEGICNPIITKMYQ 192
+ + + + R + + E QKELEG+CNPIITK+YQ
Sbjct: 658 EDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHGG*EAQGKDL*L* 330
+GRLSKEEI+RM+N+AEKY+ ED+ Q+E I A+N LESY + +GK L
Sbjct: 508 KGRLSKEEIDRMINDAEKYKSEDEAQREKIAARNRLESYAFGVKSAISEPSLEGK---LS 564
Query: 329 QADHPRQVQRHHQVAGF---QPTGRQGGYEHKQKELEGICNPIITKMY 195
Q+D + +V + + +E ++KEL+ +C+PI+ K++
Sbjct: 565 QSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVH 612
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/104 (29%), Positives = 49/104 (47%)
Frame = -2
Query: 547 STTKETKITITNDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPSRPRMHWNLTCFSMKSTM 368
ST K ITITNDK ++ + + ++R R F +KS +
Sbjct: 495 STGKTGSITITNDKGRLSKEEIDRMINDAEKYKSEDEAQREKIAARNRLESYAFGVKSAI 554
Query: 367 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRK 236
+ L+ K+S SDK T+ +K + + WL+ N LA+KE+ K
Sbjct: 555 SEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEK 598
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESY 393
Q RL+ E+IERMVN+AEK+ ED K KE ++A+N LESY
Sbjct: 1202 QNRLTPEDIERMVNDAEKFADEDKKTKEKVEARNELESY 1240
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Frame = -2
Query: 544 TTKETKITITNDKV-VSPRKRSSVWLMRQR-STEXRMTSKRRPSRPRMHWNLTCFSMKST 371
T + KITITND+ ++P + ++ + E + T ++ +R + +S+K+
Sbjct: 1190 TGNKEKITITNDQNRLTPEDIERMVNDAEKFADEDKKTKEKVEARNELE--SYAYSLKNQ 1247
Query: 370 MED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRKNWK 227
+ D EKL K+S+ DK+TI + I W+D NQ A ED ++ WK
Sbjct: 1248 VGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRKWK 1296
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -1
Query: 515 QRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNAL 402
Q G LSK+ IE M+ EAEKY E DKQK+ + K +
Sbjct: 310 QSSGGLSKDAIENMIKEAEKY-AEADKQKKVEKLKEEI 346
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 33.9 bits (74), Expect = 0.088
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 491 EEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHE 378
EE+ER+ E +K E+ K++ET++ K L+ +L+ E
Sbjct: 285 EELERLKEEKDKMLEEELKKRETLEEKQKLQDKILEEE 322
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 371 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 408
>SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 322 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 359
>SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12)
Length = 651
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 198 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 235
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 435 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 472
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 1103 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 1140
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 543 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 580
>SB_4914| Best HMM Match : RVT_1 (HMM E-Value=2.5e-16)
Length = 548
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = -2
Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
E+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 33 EQLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 70
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -1
Query: 530 QDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNAL-ESYLLQHEV 375
++ Q + + KEE ER+ EAE+ R ED++Q+ + + A E ++HE+
Sbjct: 405 EERQRQEEEKRQKEEEERLRVEAERQREEDERQRAEDERQRAEDERQRVKHEM 457
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 515 QRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALE 399
+RQ R ++ I R EAE+ R E +++++ + +ALE
Sbjct: 512 ERQAREEEDRIRREREEAERLRREKEQREQLVPHSDALE 550
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 367 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRK 236
E E +KE + +++++ KC +T K LD+++ D+ED R+
Sbjct: 1077 EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQEDEEVQRE 1120
>SB_38927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 30.7 bits (66), Expect = 0.82
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = -2
Query: 358 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 2 QLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 38
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 530 QDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALES 396
Q+ H + + + K E+E+ E EK R E +KQ+ + K LES
Sbjct: 94 QEQHLKEEQEI-KNEVEKERQEEEKRRMEIEKQRMESEKKRILES 137
>SB_45583| Best HMM Match : RVT_1 (HMM E-Value=1.4e-05)
Length = 182
Score = 30.7 bits (66), Expect = 0.82
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = -2
Query: 358 KLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
+LK I+D +++ ++ K N+ ++W+ + + +K+D S
Sbjct: 2 QLKTTINDLEQREVIKKVNEPVEWVSNLVIVEKKDKS 38
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 530 QDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALES 396
Q+ H + + + K E+E+ E EK R E +KQ+ + K LES
Sbjct: 212 QEQHLKEEQEI-KNEVEKERQEEEKRRMEIEKQRMESEKKRILES 255
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/95 (26%), Positives = 37/95 (38%)
Frame = -2
Query: 520 ITNDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPSRPRMHWNLTCFSMKSTMEDEKLKEKI 341
+T+ K + R R S R T+ +K +P RPR +C + S K K
Sbjct: 1 MTSRKTKTKRPRPSGKTKTSRKTKTSHKTKTKPKRPRQAARPSCKTKPS--RKTKTSRKT 58
Query: 340 SDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRK 236
S K K + K S++ + TSRK
Sbjct: 59 KTSLKTKTKGKTRTSSKTKTSHKTKTSRNTKTSRK 93
>SB_52507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEV 375
QGR KEE E E E+ E+++++E + + E LL+ ++
Sbjct: 23 QGRQEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEVLLKTKI 67
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -2
Query: 142 PEPEVPPPGLEALAPPSRRSIKP-TFHXTRKPTCNNHLVTSP 20
P+P+ PPPG PPS + P T +P VT P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQP 69
>SB_1024| Best HMM Match : Ank (HMM E-Value=0)
Length = 891
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 187 PEESP--EVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 71
PE+ P EV A R E P+ E PP +PP ++ KPT
Sbjct: 771 PEQPPIGEVESAVRREQPKSEKTPPSTTP-SPPPKQPSKPT 810
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/58 (18%), Positives = 30/58 (51%)
Frame = -1
Query: 542 HQGDQDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYH 369
HQ Q H +Q Q + +++ ++ + ++ + + +Q++ Q + + QH+ +H
Sbjct: 303 HQYQQQHQHQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQHQHHH 360
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = -1
Query: 530 QDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHGG*EAQ 351
Q H + +G S+ + R+ +E + Q+E + +N+ E+ + + H AQ
Sbjct: 1105 QQHESEMEGVDSRIQQARLESENNFKEILETHQREMEEIRNSHENKMQEMAENHASELAQ 1164
Query: 350 GKDL*L*QADHPRQVQRHHQV 288
KD+ Q +++ HHQ+
Sbjct: 1165 MKDIYEKQNRESEKLRSHHQL 1185
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -2
Query: 547 STTKETKITITNDKVVSPRKRSSVWLMR----QRSTEXRMTSKRRPSRPRMHWNLTCFSM 380
S +K +K + +K +SP + WL+R QR + R+ KRR +
Sbjct: 105 SESKSSKKEVY-EKALSPWEE---WLVRKTAEQREKQMRIREKRRKEKEEFEKQRKLKED 160
Query: 379 KSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
K +EK+ E I +K+ + K + + L + A+KE+ +
Sbjct: 161 KQKEIEEKINEWIDKKNKEILKSKTSS--QKLQEQKQAEKEEQN 202
>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
Length = 1417
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 122 GRHLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCLPILSA--CAHILLVGQLVGIQPLD 295
G +R R+ SP Y G G L +C P A C HI +G+ G+ D
Sbjct: 584 GTRMRYRLCDSPSPRY--GGKECHGERILEQECNTDPCPEAHSCRHIQQLGKSKGVNYRD 641
Query: 296 GVVALVEDG 322
GV + DG
Sbjct: 642 GVYKINPDG 650
>SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84)
Length = 649
Score = 28.3 bits (60), Expect = 4.4
Identities = 27/146 (18%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = -2
Query: 535 ETKITITNDKVVSPRKRSSVWLMRQRSTEXRMTSKRRPSRPRMHWNLTCFSMKSTMEDEK 356
+++++ + ++SPRK SSV R E K + P + + F++ + ++
Sbjct: 403 KSEVSGEQNSILSPRKNSSVSNERTNYQELAADDKDTVNSPAKNGS---FTLSPSENGQR 459
Query: 355 LKEKISDSDKQTILDKCNDTIKWLD---SNQLADKEDMSTSRKNWKAFAIR**RRCTRVP 185
+ + SD+ + ++ N ++K + ++ + E+ S +WK A+ ++ T +
Sbjct: 460 NLQGSTLSDEDVVTNE-NGSVKIGEPPATHSTEEPEERKASVDSWKDDAMI--QKMTSIK 516
Query: 184 EESPEVCRASRAEHPEPEVPPPGLEA 107
SP + ++ P P ++A
Sbjct: 517 SYSPAPYKQQESKPQRPSPSPTSIDA 542
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -2
Query: 331 DKQTILDKCNDTIKWLDSNQLADKEDMSTSRKNWKAF-AIR**RRCTRVPEESPEVCRAS 155
+KQT D+ +D +W+ +N +D+ + WK A+R R+ + + P +
Sbjct: 95 EKQTCRDERSDC-EWILNNV----DDIGEYCERWKDDPAVRKCRKTCGLCNKIPSPPNPT 149
Query: 154 RAEHPEPEVPPPGLEALAPPSRRSIKP 74
A PEPE PP E + PP ++ P
Sbjct: 150 EA--PEPETVPPQPETV-PPQPETVPP 173
>SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33)
Length = 2822
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = -2
Query: 367 EDEKLKEKIS-DSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRKNWKAFAIR**RRCTR 191
+D+ L E D D D+ ND D + + E T R+ W + +
Sbjct: 1577 DDDDLPEPDDEDEDDDDDEDEENDEENEDDYDLSEEVERPGTRRRTWDDEFVLKRQFSAL 1636
Query: 190 VPEESPEVCRASRAEHPEPEVPPPGLEALAPP 95
VP P R + + + EVPPPG + + P
Sbjct: 1637 VPAFDPRPGRTNVQQTQDIEVPPPGSKRPSTP 1668
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 128 HLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCLPILSACAHI 256
HL +RVL P P L LS C CLP+ +C H+
Sbjct: 1140 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVHL 1178
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 128 HLRLRVLRPGSPAYLRGLLRHPGTSSLLSDCKCLPILSACAHI 256
HL +RVL P P L LS C CLP+ +C H+
Sbjct: 1177 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVHL 1215
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 187 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT-----FHXTRKPTC 44
P + P R SR E P PE PP L+ LA P+ + +P+ R PTC
Sbjct: 19 PAKKPPPRRRSR-ETP-PETPPVQLKHLAGPAEKPHRPSRETPPVQPRRNPTC 69
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -2
Query: 337 DSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRKNWKAFAIR**RRCTRVPEESPEVCRA 158
D KQ L+K ++ L D+ED + W+ +R + R EE +V
Sbjct: 122 DYQKQLALEKRRQDLQ--RQLALMDEEDAAVD-DGWEGKEVR--KEARRQEEEHRKVTVV 176
Query: 157 SRAEHPEPEV-PPPGLEALAPP 95
HPE V PP APP
Sbjct: 177 HSKLHPEQSVTPPASTSPSAPP 198
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Frame = +2
Query: 35 VVVTGRFTCGVECWFNRPPRWWGQRLQPRGRH---------LRLRVLRPGSPAYLRGL-L 184
+V+ G F CG W + PP P + L VL P PA L L L
Sbjct: 78 IVIAGDFNCGDINWNSDPPSITNHASAPMMNYLLDFISNNALTQHVLHPTRPASLNTLDL 137
Query: 185 RHPGTSSLLSDCKCLPI 235
+ +L+SD + LP+
Sbjct: 138 VLSSSPALVSDVRILPV 154
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 127 PPPGLEALAPPSRRSIKPTFHXTRKPTCNNHLVTSP 20
PPP A PP R S P TR P N+ P
Sbjct: 263 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 298
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 539 QGDQDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNA 405
QG+ H ++ S E +R+ E E+Y+ +E+I+A+ A
Sbjct: 135 QGEAIHKQMKELEFSSEREDRIKRELEQYQERVKTLEESIEAERA 179
>SB_14297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 418 RPRMHWNLTCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 272
R H+ C +++ EK + QT+LDKC +WL +N+
Sbjct: 136 RSNSHFQALCTCLQAI---EKSDPSLLTEVNQTLLDKCQYIEEWLTANE 181
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 127 PPPGLEALAPPSRRSIKPTFHXTRKPTCNNHLVTSP 20
PPP A PP R S P TR P N+ P
Sbjct: 175 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 210
>SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09)
Length = 265
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -1
Query: 503 RLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHE 378
R +EE +++ + +K+ ++ K+ E ++ KNA L + E
Sbjct: 53 RKEREEEDKLWEDDDKHEQQEKKRLEALERKNAARQMLEEEE 94
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 548 VHHQGDQDHHYQRQGRLSKEEIERMVNEAEKYRXED--DKQKETIQAKNALES 396
+H + + D Q+ RL + + R E EK + D+Q+ T ++KNAL S
Sbjct: 206 LHKEVEGDLEKQQTLRLQRLDGRRTYLEDEKMELSEALDRQRHTYESKNALTS 258
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -2
Query: 142 PEPEVPPPGLE-ALAPPSRRSIKPTFH 65
P P PPP L A APP R P H
Sbjct: 425 PPPPPPPPALRLACAPPRLRFTSPVLH 451
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Frame = -2
Query: 190 VPEESPEVCRASRAEHPEPEVPP----PGLEALAPPSRRSIKPTFHXT---RKPTCNNHL 32
VP ++P ++S A +P P+ PP A P ++ S PT + P+ H
Sbjct: 789 VPTQAPTEMKSSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGENPSPTTHY 848
Query: 31 VTSP 20
T P
Sbjct: 849 ATKP 852
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 494 KEEIERMVNEAEKYRXEDDKQKETIQAKNALESYL--LQHEVY 372
K+E R+ +EAEK E++K K+ + + + YL L EVY
Sbjct: 467 KDEQSRLFDEAEKLEKENNKLKDEVGSLSKEIEYLKNLMLEVY 509
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.5 bits (58), Expect = 7.6
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Frame = -2
Query: 379 KSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRKNWKAFAIR**RR 200
K + K K + D D ++T DS + D ++ + KN +F R
Sbjct: 841 KKKKKHAKRKRSDEEFDSYESGDYTDETGSSCDSEEYTDTDNDEPAHKNDGSFPRRN-ES 899
Query: 199 CTRVP--EESPEVCRASRAEHPEPEVPPPGLEALAPP 95
++ P ESP + P P PPPG A PP
Sbjct: 900 PSQTPGGSESPSASPPGGSVPPPP--PPPGGNAPLPP 934
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHGG*EAQGK 345
+GR E + +++ +KY D K+T A++ LE +L + G A GK
Sbjct: 711 KGRKRYESDNKGLSKKQKYGRLTDLNKQTNTARSRLEGKVLSRKAVKRGGGAYGK 765
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 27.5 bits (58), Expect = 7.6
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -2
Query: 364 DEKLKEKISDSDKQTILDKCND 299
D +++ ++ D D+QT+ D C+D
Sbjct: 378 DVEVRRRVQDIDRQTVTDDCDD 399
>SB_30575| Best HMM Match : Pico_P2A (HMM E-Value=5.9)
Length = 564
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 544 TTKETKITITNDKVVSPRKRSSVWLMR--QRSTEXRMTSKRRPSR-PRMHWNLTCFSMKS 374
+ K+T IT + PRKR++ W Q + + R+PS+ R + + F+ K
Sbjct: 56 SAKQTAITGEQPQPYLPRKRNADWKTTWFQENLVFKNQVLRKPSQNSRRQYKVLKFTKKR 115
Query: 373 TMEDEKLKEKISDS 332
K++EKI+D+
Sbjct: 116 GTR-TKIQEKITDT 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,824,097
Number of Sequences: 59808
Number of extensions: 344722
Number of successful extensions: 1904
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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