Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0439.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.2  
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    25   1.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   3.8  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   3.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.0  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   8.8  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   8.8  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        23   8.8  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        23   8.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   8.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 361 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMSTSRKN 233
           E+LKE +  + +Q  L      I+ L++       D+ TS+KN
Sbjct: 696 EELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKN 738


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 174 GDSSGTLVHLRYYRIANAFQFFL 242
           GDS G L  LRY  + N F F +
Sbjct: 40  GDSGGPLQTLRYDLLGNIFSFIV 62


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -1

Query: 329 QADHPRQVQRHHQVAGFQPTGRQGGYEHKQKELEGICNPIITKM 198
           Q    +Q+  HH      P G +     K    E   +P++ KM
Sbjct: 152 QQQQQQQLHHHHHHHHNAPAGGESSTSEKDSSRESSKSPMLMKM 195


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 373 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDMS 248
           T+E E + + I++ +   +LDK +  I  L   Q   K D+S
Sbjct: 344 TLEMELISQGIAEPNSVRVLDKASVPIVKLTDRQTQVKVDIS 385


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 205 RRCTRVPEESPEVCRASRAEHPEPEVPPP 119
           R+C+R    SP+   A ++++  P VPPP
Sbjct: 44  RKCSR--NGSPKFAPAVQSKNRMPPVPPP 70


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 509 QGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALES 396
           Q R  +EE ++M NE+ K   +   QK+  Q    + S
Sbjct: 206 QARREREEQDKMKNESLKSAQQHHSQKQAQQEHTVVGS 243


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 19/104 (18%), Positives = 44/104 (42%)
 Frame = -1

Query: 545 HHQGDQDHHYQRQGRLSKEEIERMVNEAEKYRXEDDKQKETIQAKNALESYLLQHEVYHG 366
           H Q  Q    QRQ +  +++ ++   + ++ + +  +Q++  Q +   +    QH+    
Sbjct: 311 HQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQ---QHQQQQQ 367

Query: 365 G*EAQGKDL*L*QADHPRQVQRHHQVAGFQPTGRQGGYEHKQKE 234
             + Q +     Q   PRQ   H +    Q + R    + +Q++
Sbjct: 368 QWQQQQQ-----QQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQ 406


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 163  RASRAEHPEPEVPPPGLEALAPPSRRSIK 77
            R     H   +VPPPG+E   P  +  I+
Sbjct: 1740 RMEEGAHLSFKVPPPGIEFTLPSPKIGIE 1768


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 427 RP-SRPRMHWNLTCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEDM 251
           RP S P+    L CFS+ S    E +KEK        I   C  T   L   Q+  +++ 
Sbjct: 11  RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE----ITHHCQKTPFLLVGTQIDLRDEN 66

Query: 250 STSRK 236
           ST  K
Sbjct: 67  STLEK 71


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 335 VRDLFLELLILHGRLHAEASKIPMHSWP-GWSPFAC 439
           VR  FL   + HG  HAE  ++   S P G + +AC
Sbjct: 165 VRYTFLLRQLNHGGDHAECGQVERKSQPFGPARWAC 200


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 263 VGQLVGIQPLDGVVALVED 319
           V  + G++P+DG+V L ++
Sbjct: 27  VDHVSGVEPIDGIVVLDDE 45


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 263 VGQLVGIQPLDGVVALVED 319
           V  + G++P+DG+V L ++
Sbjct: 27  VDHVSGVEPIDGIVVLDDE 45


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 199 CTRVPEESPEVCRASRAEHP 140
           C+ VP++S E+   S  +HP
Sbjct: 741 CSAVPKDSDEIEVISSTQHP 760


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,841
Number of Sequences: 2352
Number of extensions: 10671
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)