Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0437.Seq
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   1.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   5.3  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   5.3  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.2  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 431 QQPTAHRVPPQALRLQSHRRGPHHLPI 511
           QQ   H+  PQ    Q +   PHH P+
Sbjct: 309 QQHHHHQHQPQQQHQQQYHSHPHHTPV 335


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 314 VICF*HCACVWLEFYRFVGTVV 249
           + C   C  VWL+F  +V  +V
Sbjct: 784 IFCVWDCCWVWLKFQEWVAFIV 805


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 117 LYIHVPAHGARPITKH*IITYINSERNPHLHGH 215
           L ++VP +G      H +I +I+   N +L GH
Sbjct: 354 LSVNVPYYGNYHSLGHVLIGFIHDPDNLYLEGH 386


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 201 HLHGHQYKTTDTYLLTHNCPYESVK 275
           HLHGH ++      ++ N   E ++
Sbjct: 869 HLHGHAFRVVGMDRVSRNTTIEDIR 893


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,358
Number of Sequences: 2352
Number of extensions: 12170
Number of successful extensions: 74
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)