Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0437.Seq
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    31   1.4  
BT024236-1|ABC86298.1|  959|Drosophila melanogaster LD10772p pro...    28   7.7  
AY119108-1|AAM50968.1|  647|Drosophila melanogaster RE09079p pro...    28   7.7  
AE014297-360|AAF51949.1|  959|Drosophila melanogaster CG10979-PA...    28   7.7  

>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 129 VPAHGARPITKH*IITYINSERNPHLHGHQYKTTDTYL 242
           VP H   P T H  ++Y +   +PH H H ++  D+Y+
Sbjct: 323 VPPHH-HPYTVHHPVSYAHPHGHPHAHPHPHEHFDSYI 359


>BT024236-1|ABC86298.1|  959|Drosophila melanogaster LD10772p
           protein.
          Length = 959

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 204 LHGHQYKTTDTYLLTHNCPYESVKFEPNTRTVLKTNDNSIGIVEDCA---MRGFKRRILH 374
           + G + + T+ Y+ TH C Y   + + +   +L   +  + ++E  A   ++ ++RR+ H
Sbjct: 574 IEGDRDQLTEQYVSTHECEYS--RDDVDGDIILLDKEEELTVMEKDAKPPIKTYERRLKH 631

Query: 375 ARTL 386
            +TL
Sbjct: 632 LKTL 635


>AY119108-1|AAM50968.1|  647|Drosophila melanogaster RE09079p
           protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 204 LHGHQYKTTDTYLLTHNCPYESVKFEPNTRTVLKTNDNSIGIVEDCA---MRGFKRRILH 374
           + G + + T+ Y+ TH C Y   + + +   +L   +  + ++E  A   ++ ++RR+ H
Sbjct: 262 IEGDRDQLTEQYVSTHECEYS--RDDVDGDIILLDKEEELTVMEKDAKPPIKTYERRLKH 319

Query: 375 ARTL 386
            +TL
Sbjct: 320 LKTL 323


>AE014297-360|AAF51949.1|  959|Drosophila melanogaster CG10979-PA
           protein.
          Length = 959

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = +3

Query: 204 LHGHQYKTTDTYLLTHNCPYESVKFEPNTRTVLKTNDNSIGIVEDCA---MRGFKRRILH 374
           + G + + T+ Y+ TH C Y   + + +   +L   +  + ++E  A   ++ ++RR+ H
Sbjct: 574 IEGDRDQLTEQYVSTHECEYS--RDDVDGDIILLDKEEELTVMEKDAKPPIKTYERRLKH 631

Query: 375 ARTL 386
            +TL
Sbjct: 632 LKTL 635


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,405,006
Number of Sequences: 53049
Number of extensions: 506397
Number of successful extensions: 1419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)