Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0436.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   3.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   8.3  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 419 WMKFIIFILLQDFGQ 463
           W  +IIF LLQ FGQ
Sbjct: 467 WSPYIIFDLLQVFGQ 481


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 197 QKALSLTLFGSLFPSPVVDQH 259
           Q ALS+T  G LF  P+ D H
Sbjct: 845 QSALSITDLGQLFYRPLRDVH 865


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 124 WFLNSNYISQ*SPWLSYQLWVIAYTESLVLNPIWFSI 234
           +FLNS  +     +LSY  W     E+L++N  W ++
Sbjct: 599 FFLNSASVPAYFKYLSYLSWFRYANEALLINQ-WSTV 634


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 124 WFLNSNYISQ*SPWLSYQLWVIAYTESLVLNPIWFSI 234
           +FLNS  +     +LSY  W     E+L++N  W ++
Sbjct: 599 FFLNSASVPAYFKYLSYLSWFRYANEALLINQ-WSTV 634


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 124 WFLNSNYISQ*SPWLSYQLWVIAYTESLVLNPIWFSI 234
           +FLNS  +     +LSY  W     E+L++N  W ++
Sbjct: 577 FFLNSASVPAYFKYLSYLSWFRYANEALLINQ-WSTV 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,844
Number of Sequences: 2352
Number of extensions: 15179
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)