Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0433.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XUQ8 Cluster: Putative uncharacterized protein; n=3; ...    35   2.2  
UniRef50_Q7RRV4 Cluster: Putative uncharacterized protein PY0061...    33   6.7  
UniRef50_Q22GU4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_Q4XUQ8 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 543

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 191 KRICILLKAIYFVILKFLKYKGQGTILNVFKDHKEN 84
           K+ICI LK IY +ILK+  Y     I N F  H  N
Sbjct: 367 KKICIFLKTIYLIILKYSIYVQNTKISNDFFTHNIN 402


>UniRef50_Q7RRV4 Cluster: Putative uncharacterized protein PY00613;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY00613 - Plasmodium yoelii
           yoelii
          Length = 602

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -1

Query: 191 KRICILLKAIYFVILKFLKY 132
           K+ICI LK+IYF+ILK+  Y
Sbjct: 147 KKICIFLKSIYFIILKYSIY 166


>UniRef50_Q22GU4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 485

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 350 DFKNTKNI-IRILFELQCSDFLYLLCQIVVANMKHVSNLFIALPQLIKLE 496
           + K+ KN+ + + F     D L L+CQ    NM  V N+F  + +L KLE
Sbjct: 244 NLKSLKNLNLDLSFNENIQDSLILICQKTNLNMNQVQNIFENIYKLYKLE 293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,005,748
Number of Sequences: 1657284
Number of extensions: 11069293
Number of successful extensions: 22407
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22402
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)