Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0433.Seq
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19960.1 68417.m02923 potassium transporter family protein si...    31   0.97 
At2g35060.1 68415.m04301 potassium transporter family protein si...    29   3.9  
At1g31120.1 68414.m03808 potassium transporter family protein si...    28   5.2  
At4g10520.1 68417.m01724 subtilase family protein contains simil...    28   6.8  

>At4g19960.1 68417.m02923 potassium transporter family protein
           similar to potassium transporter [Arabidopsis thaliana]
           gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
           member, PMID:11500563; contains Pfam profile PF02705: K+
           potassium transporter
          Length = 842

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -1

Query: 215 LRSRLVHIKRICILLKAIYFVI-LKFLKYKGQGTILNVFKDHKENLYFLDKMCAVYCPFF 39
           L + + +   + I L   +FV     L Y GQ   L + K+H ++ ++     +VY P F
Sbjct: 335 LYADIAYFPLLAIQLAFTFFVFPCLLLAYCGQAAYLVIHKEHYQDAFYASIPDSVYWPMF 394

Query: 38  VI 33
           ++
Sbjct: 395 IV 396


>At2g35060.1 68415.m04301 potassium transporter family protein
           similar to HAK2 [Hordeum vulgare] GI:7108599, potassium
           transporter HAK2p [Mesembryanthemum crystallinum]
           gi|14091471|gb|AAK53759; KUP/HAK/KT Transporter family
           member, PMID:11500563; contains Pfam profile PF02705: K+
           potassium transporter
          Length = 792

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -1

Query: 194 IKRICILLKAIYFVILKFLKYKGQGTILNVFKDHKENLYFLDKMCAVYCPFFVI 33
           +  + I    I F  L  L Y GQ   +  + DH  + ++     +VY P F+I
Sbjct: 325 VSAVQIAFTVIVFPCL-LLAYSGQAAYIRRYPDHVADAFYRSIPGSVYWPMFII 377


>At1g31120.1 68414.m03808 potassium transporter family protein
           similar to HAK2 [Hordeum vulgare] GI:7108599, potassium
           transporter [Arabidopsis thaliana]
           gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
           member, PMID:11500563; contains Pfam profile PF02705: K+
           potassium transporter
          Length = 796

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 140 LKYKGQGTILNVFKDHKENLYFLDKMCAVYCPFFVI 33
           L Y GQ   L  +  H E+ ++      VY P F+I
Sbjct: 341 LAYSGQAAYLRKYPHHVEDAFYQSIPSLVYWPMFII 376


>At4g10520.1 68417.m01724 subtilase family protein contains
           similarity to subtilase; SP1 GI:9957714 from [Oryza
           sativa]
          Length = 756

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +1

Query: 475 ATINKARKLASLFS*ICQYCAETLLLNESYND*LLFXCKVIGSNTHVTSTIIGIIQPNPN 654
           A+I+  RKL      +    AE  ++N + N   L      G  THV STI G   PN +
Sbjct: 176 ASIHCNRKLIGAKYFVDGLVAEFGVVNRTQNPEYLSPRDFAGHGTHVASTIGGSFLPNVS 235

Query: 655 SKTLG 669
              LG
Sbjct: 236 YVGLG 240


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,542,010
Number of Sequences: 28952
Number of extensions: 246877
Number of successful extensions: 423
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)