Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0431.Seq
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.37 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.5  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.37
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 318 GRRFTLVIPLLISFALNCISSLANHW 395
           GR F L    L+  A++C+   A HW
Sbjct: 170 GRFFGLDSQRLLGVAMDCLKGNAKHW 195


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 297 GYVSDTKGRRFTLVIPLLISFALNCI 374
           G  +DT  R FT+ IP  +  A +CI
Sbjct: 74  GITTDTIDRVFTVAIP-FVGIANSCI 98


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = -1

Query: 237 GDSQVEVAGRCHYQGESKKIHADSQEYQRAGQHQEHVVS 121
           G  Q     +C + G+S +  A+   + +  QH  +++S
Sbjct: 471 GAEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHYTNIIS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,822
Number of Sequences: 336
Number of extensions: 1812
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)