Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0431.Seq
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 36 0.008
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 36 0.008
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 35 0.019
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 33 0.077
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 33 0.077
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 32 0.18
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 31 0.31
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 31 0.31
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 30 0.54
Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical pr... 29 0.94
AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like tran... 29 0.94
U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical p... 29 1.2
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 29 1.7
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 28 2.2
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 28 2.2
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 28 2.2
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 2.2
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 28 2.2
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 2.2
Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical pr... 28 2.9
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z77659-2|CAB01165.1| 183|Caenorhabditis elegans Hypothetical pr... 27 6.7
U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical pr... 27 6.7
U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 26 8.8
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 246 HSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
H+ S+ VG ++ S +SD GRR +IPL IS A N I + A ++L+
Sbjct: 141 HATSIFLVGGMIVSPFVSQLSDILGRRPLFLIPLYISVAANLICAAAPNYLI 192
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 246 HSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
H+ S+ VG ++ S +SD GRR +IPL IS A N I + A ++L+
Sbjct: 141 HATSIFLVGGMIVSPFVSQLSDILGRRPLFLIPLYISVAANLICAAAPNYLI 192
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
F G++L+S WG + D GRR L L++ + IS ++ H+ V
Sbjct: 129 FSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYV 174
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
F G++L+S WG + D GRR L L++ + IS ++ H+ V
Sbjct: 129 FSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYV 174
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.033
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 201 SDSGLRPPLDCRPKGHSNSLP----FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALN 368
S + + + CRP G + P +VG+++ + + GYV+D GR+ T ++ +LI
Sbjct: 92 SSAAMEFEIYCRP-GWKDFRPAFVQYVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSL 150
Query: 369 CISSLAN 389
+S+ N
Sbjct: 151 SLSATFN 157
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.077
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 252 NSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
+ + F G++ ++ +G VSD GR+ V L + +N ++ LA ++ V
Sbjct: 88 SQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQV 137
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.077
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 252 NSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
+ + F G++ ++ +G VSD GR+ V L + +N ++ LA ++ V
Sbjct: 88 SQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQV 137
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 31.9 bits (69), Expect = 0.18
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 249 SNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLAN 389
S++ F+G ++ + + GY+SDT GRR + +L+ +S+ N
Sbjct: 109 SSTSTFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALN 155
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 228 DCRPKGHSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISS 380
D + ++ ++ G+++ + ++G VSD GRR L+I + + N ISS
Sbjct: 121 DAKKVKNTITIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISS 171
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 228 DCRPKGHSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISS 380
D + ++ ++ G+++ + ++G VSD GRR L+I + + N ISS
Sbjct: 121 DAKKVKNTITIQTFGVLVGAAIFGQVSDNFGRRKALIISCIGNAIFNLISS 171
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 30.3 bits (65), Expect = 0.54
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 237 PKGHSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLA 386
P + S+ F+G +L ++ V+D GRR ++I LL++ + + SLA
Sbjct: 128 PAELTTSIYFLGNLLIGQLFAVVADRFGRRPIIIICLLLTGIVGSLGSLA 177
>Z48783-2|CAC42295.1| 805|Caenorhabditis elegans Hypothetical
protein F33H1.1b protein.
Length = 805
Score = 29.5 bits (63), Expect = 0.94
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -2
Query: 185 KRSMPIPRSISEL----VNTRSTL*VPLPVLLRASSNATDPSSAAELSDI--FTNNFNGT 24
K+S+P+ S L V S + P + L +SS A S E+ I T++ NGT
Sbjct: 122 KKSLPVSFQCSNLNDGTVGDASVMLDPTKISLHSSSVAYGEESQDEMEVIQHSTDDPNGT 181
Query: 23 RDTSDYN 3
R+ DYN
Sbjct: 182 REEFDYN 188
>AF226156-1|AAF61564.1| 805|Caenorhabditis elegans RFX-like
transcription factor DAF-19 protein.
Length = 805
Score = 29.5 bits (63), Expect = 0.94
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = -2
Query: 185 KRSMPIPRSISEL----VNTRSTL*VPLPVLLRASSNATDPSSAAELSDI--FTNNFNGT 24
K+S+P+ S L V S + P + L +SS A S E+ I T++ NGT
Sbjct: 122 KKSLPVSFQCSNLNDGTVGDASVMLDPTKISLHSSSVAYGEESQDEMEVIQHSTDDPNGT 181
Query: 23 RDTSDYN 3
R+ DYN
Sbjct: 182 REEFDYN 188
>U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical
protein F21F8.11 protein.
Length = 530
Score = 29.1 bits (62), Expect = 1.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 225 LDCRPKGHSNSLPFVGIILASYVWGYVSD 311
LD + G +++P + ++A +WGY+ D
Sbjct: 340 LDVQSNGFYSAIPHISNLIAKLIWGYLMD 368
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 267 VGIILASYVWGYVSDTKGRRFTLVIPLLIS 356
VGI + S ++GY+SD GR+ LLIS
Sbjct: 90 VGIFVGSILFGYISDHFGRQKVCQYSLLIS 119
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLA 386
+VG + + ++GYV+D GRR + + L + SS A
Sbjct: 162 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFA 202
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLA 386
+VG + + ++GYV+D GRR + + L + SS A
Sbjct: 145 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFA 185
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 255 SLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
++ F+G ++ + V+G++ D GR+ + + I S A W V
Sbjct: 101 TIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWEV 149
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -3
Query: 262 GRELECPFGRQSSGGRRPLSLPG*IQKDPCRFPGVSASWSTPGARCKCRYQF 107
G + CPF S + PLS + C+ G S +CKCR F
Sbjct: 265 GYKCHCPFEFVGSQCKTPLSKVRCSAEHVCKNGGACISMDDTNIQCKCRRGF 316
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLA 386
+VG + + ++GYV+D GRR + + L + SS A
Sbjct: 145 YVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFA 185
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -3
Query: 262 GRELECPFGRQSSGGRRPLSLPG*IQKDPCRFPGVSASWSTPGARCKCRYQF 107
G + CPF S + PLS + C+ G S +CKCR F
Sbjct: 265 GYKCHCPFEFVGSQCKTPLSKVRCSAEHVCKNGGACISMDDTNIQCKCRRGF 316
>Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical
protein T10C6.6b protein.
Length = 387
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 270 GIILASYVWGYVSDTKGRRFTLVIPLLI 353
G I+ S + GY++D G+R L++ +L+
Sbjct: 221 GGIIGSVLGGYITDKMGKRSPLIVAMLV 248
>Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical
protein T10C6.6a protein.
Length = 456
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 270 GIILASYVWGYVSDTKGRRFTLVIPLLI 353
G I+ S + GY++D G+R L++ +L+
Sbjct: 290 GGIIGSVLGGYITDKMGKRSPLIVAMLV 317
>Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical
protein C43C3.2 protein.
Length = 498
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 221 RSQAAVTTRVNPKRSMPIPRSISELVNTRSTL*VPLPVLLRASSN 87
R A + N S+P+ ++IS + N S VP+P+ N
Sbjct: 439 RVSAMIHNNNNNTESLPLAQNISNMTNKDSATIVPMPMSANVDGN 483
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/49 (20%), Positives = 23/49 (46%)
Frame = +3
Query: 255 SLPFVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCISSLANHWLV 401
++ F+G+++ + +G++ D GR+ + + S A W V
Sbjct: 101 TIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEV 149
>Z77659-2|CAB01165.1| 183|Caenorhabditis elegans Hypothetical
protein F23B12.3 protein.
Length = 183
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 222 PLDCRPKGHSNSLPFVGIILASYVWGYVSDTKGRRFTLVIPL 347
P+ +GH+ S+ F G ++ + W +D G RF ++ L
Sbjct: 34 PIGLTLQGHNESIWFKGFVIQPFKWN--NDQLGERFGQLVRL 73
>U29377-2|AAA68713.4| 627|Caenorhabditis elegans Hypothetical
protein K05F1.6b protein.
Length = 627
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 240 KGHSNSLPFVGIILASYVWGYVSDTKGRRFTLV 338
KGH++ +G +L + G SD GR+ T++
Sbjct: 127 KGHAHMFYSIGYLLGCVLGGIASDKIGRKPTII 159
>U29377-1|AAZ94294.1| 773|Caenorhabditis elegans Hypothetical
protein K05F1.6a protein.
Length = 773
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 240 KGHSNSLPFVGIILASYVWGYVSDTKGRRFTLV 338
KGH++ +G +L + G SD GR+ T++
Sbjct: 273 KGHAHMFYSIGYLLGCVLGGIASDKIGRKPTII 305
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 264 FVGIILASYVWGYVSDTKGRRFTLVIPLLISFALNCI 374
F+G +L + G+++D GRR + LL F + C+
Sbjct: 123 FIGTLLGNIALGFLADKYGRRTIYLSSLL--FGIPCV 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,916,867
Number of Sequences: 27780
Number of extensions: 179770
Number of successful extensions: 545
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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