BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0431.Seq (402 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.7 DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.7 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 4.0 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 9.2 AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 20 9.2 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 9.2 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 9.2 >Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 protein. Length = 402 Score = 22.6 bits (46), Expect = 1.7 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = +2 Query: 206 QRPATST*LSPKRAF*LSTFCWYHPCFLRVGLRIR 310 + P + L+P A S+ +Y PC + +G+ R Sbjct: 180 EHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCR 214 >DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 510 Score = 22.6 bits (46), Expect = 1.7 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 228 QVEVAGRCHYQGESKKIHADSQEY 157 Q E AG C +GE H +S Y Sbjct: 444 QREAAGNCRKRGEKIARHINSVSY 467 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 21.4 bits (43), Expect = 4.0 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +3 Query: 252 NSLPFVGIILASYVW 296 NSLP V I AS +W Sbjct: 283 NSLPKVSYIKASEIW 297 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 20.2 bits (40), Expect = 9.2 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -3 Query: 160 VSASWSTPGARC 125 V+ SWS PG C Sbjct: 248 VNGSWSLPGFVC 259 >AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. Length = 148 Score = 20.2 bits (40), Expect = 9.2 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 Query: 273 IILASYVWGY 302 +ILAS+VW Y Sbjct: 16 VILASFVWIY 25 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 20.2 bits (40), Expect = 9.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -2 Query: 95 SSNATDPSSAAELSDIFTNNFNGTRDTSDYN 3 S + T+ + E I +NN+N ++YN Sbjct: 289 SRDRTERERSKETKIISSNNYNYKNYNNNYN 319 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 20.2 bits (40), Expect = 9.2 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = -2 Query: 95 SSNATDPSSAAELSDIFTNNFNGTRDTSDYN 3 S + T+ + E I +NN+N ++YN Sbjct: 300 SRDRTERERSKETKIISSNNYNYKNYNNNYN 330 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 108,106 Number of Sequences: 438 Number of extensions: 2376 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10008927 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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