Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0426.Seq
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7F7E2 Cluster: OSJNBa0036E02.9 protein; n=5; Oryza sat...    33   2.7  
UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    33   2.7  
UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora...    32   4.8  
UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1; Syn...    31   6.3  
UniRef50_Q0UEC1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_A3LXJ0 Cluster: Bud neck involved protein; n=1; Pichia ...    31   6.3  
UniRef50_UPI0000EBC3AF Cluster: PREDICTED: hypothetical protein;...    31   8.3  

>UniRef50_Q7F7E2 Cluster: OSJNBa0036E02.9 protein; n=5; Oryza
           sativa|Rep: OSJNBa0036E02.9 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 498

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 129 RFECETRLVKSH---CLEPPDSRGSTXSISLPDSARLASALEAFRIIPRM 269
           R  C  R +K H   C  PP  R +  S++LP  +RL     A RI+ R+
Sbjct: 425 RLRCRLRCIKLHPGGCFAPPTHRLNAFSLALPSHSRLWLPSAAPRILSRI 474


>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 357 IVILLSTXGTAVSDIWFMHSTER 289
           +VILLST GTA SD W +H  E+
Sbjct: 660 VVILLSTRGTADSDNWHLHLAEK 682


>UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora|Rep:
            CG31169-PA, isoform A - Drosophila melanogaster (Fruit
            fly)
          Length = 1469

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = -3

Query: 244  SKAEASLAESGKDMLXVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRR 92
            SK EA +    KD+   EP ES  SK+   TS  S SK+E++R+     RR
Sbjct: 1218 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 1266


>UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1;
           Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
           protein - Syntrophus aciditrophicus (strain SB)
          Length = 90

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +3

Query: 102 PNGLRRRVSRFECETRLVKS--HCLEPPDSRGS 194
           P+ ++R V  + CE+R+ +S  HCL  P SRG+
Sbjct: 31  PSYIKRGVPAYRCESRVGQSNFHCLNIPSSRGT 63


>UniRef50_Q0UEC1 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 619

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 138 IQNARRDVEAHLDRGDRCYRFFFL 67
           +++  R+VEAHLD GD    FFFL
Sbjct: 304 VKDINREVEAHLDHGDPRTAFFFL 327


>UniRef50_A3LXJ0 Cluster: Bud neck involved protein; n=1; Pichia
           stipitis|Rep: Bud neck involved protein - Pichia
           stipitis (Yeast)
          Length = 1404

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   DYSEPRHRTEL-YPDLRSRDARVKKKNR*HRSPRSKWASTSRLA 130
           DY +  H+  + YPD  S + R + KNR H++ R  +AS    A
Sbjct: 312 DYRKTTHKNNISYPDNMSENFRTRDKNR-HKNSRENFASNETTA 354


>UniRef50_UPI0000EBC3AF Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 285

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 285 GGXKLPSAGLS*TPLRPKPA*PNP 214
           GG   P  GL+ TPL+PKP  P+P
Sbjct: 4   GGKPAPPLGLAPTPLQPKPRKPDP 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,175,911
Number of Sequences: 1657284
Number of extensions: 6558936
Number of successful extensions: 16564
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16558
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)