Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0426.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   2.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   2.5  
BC117169-1|AAI17170.1|  567|Homo sapiens ZNF619 protein protein.       29   7.5  
AK075245-1|BAC11495.1|  560|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.              28   9.9  
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.        28   9.9  

>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 249 TPLRPKPA*PNPARICSLWSPESRE 175
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 249 TPLRPKPA*PNPARICSLWSPESRE 175
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>BC117169-1|AAI17170.1|  567|Homo sapiens ZNF619 protein protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 196 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLNTC 59
           ++  ++G   +CDF   VS S  +TR   P G+RRS +    L+TC
Sbjct: 12  IQGGDAGELCKCDFL--VSISIPQTRSDIPAGARRSSMGPRSLDTC 55


>AK075245-1|BAC11495.1|  560|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90764 fis, clone THYRO1000580, moderately
           similar to ZINC FINGER PROTEIN 184. ).
          Length = 560

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 196 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLNTC 59
           ++  ++G   +CDF   VS S  +TR   P G+RRS +    L+TC
Sbjct: 12  IQGGDAGELCKCDFL--VSISIPQTRSDIPAGARRSSMGPRSLDTC 55


>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
          Length = 1032

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
 Frame = -3

Query: 298 DRAXRWXEATIRGIILNASKAEASLAESGKDMLXVEP------RESGGSKQCDFTSRVSH 137
           D    + E   +GI+ +   A  +++E   D     P       ESGGS+  D  S+ S 
Sbjct: 653 DLIAAFTETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSE 712

Query: 136 SKRETRRRSPFG 101
             +ET    P G
Sbjct: 713 QSKETNGSEPLG 724


>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
          Length = 1013

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
 Frame = -3

Query: 298 DRAXRWXEATIRGIILNASKAEASLAESGKDMLXVEP------RESGGSKQCDFTSRVSH 137
           D    + E   +GI+ +   A  +++E   D     P       ESGGS+  D  S+ S 
Sbjct: 634 DLIAAFTETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSE 693

Query: 136 SKRETRRRSPFG 101
             +ET    P G
Sbjct: 694 QSKETNGSEPLG 705


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,850,305
Number of Sequences: 237096
Number of extensions: 962823
Number of successful extensions: 2230
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)