Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0424.Seq
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ... 28 4.0
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr... 28 4.0
AY128503-1|AAM75096.1| 585|Drosophila melanogaster SD06302p pro... 28 4.0
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC... 28 4.0
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB... 28 4.0
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA... 28 4.0
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD... 28 4.0
AY069358-1|AAL39503.1| 532|Drosophila melanogaster LD06275p pro... 28 5.3
AE014297-2565|AAF55582.1| 726|Drosophila melanogaster CG7706-PA... 28 5.3
BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro... 27 7.0
AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p pro... 27 7.0
AY051479-1|AAK92903.1| 565|Drosophila melanogaster GH14206p pro... 27 7.0
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 27 7.0
AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome s... 27 7.0
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso... 27 7.0
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P... 27 7.0
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 27 7.0
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 27 7.0
AE014134-700|AAF51041.2| 565|Drosophila melanogaster CG2955-PA ... 27 7.0
BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p pro... 27 9.2
BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p pro... 27 9.2
AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA... 27 9.2
>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
factor protein.
Length = 2527
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 166 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 225
Query: 103 N 101
N
Sbjct: 226 N 226
>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger
protein protein.
Length = 2529
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AY128503-1|AAM75096.1| 585|Drosophila melanogaster SD06302p
protein.
Length = 585
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 214 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 273
Query: 103 N 101
N
Sbjct: 274 N 274
>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
isoform C protein.
Length = 2532
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
isoform B protein.
Length = 2532
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
isoform A protein.
Length = 2532
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 170 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 229
Query: 103 N 101
N
Sbjct: 230 N 230
>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
isoform D protein.
Length = 2577
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 274 NRNFWY*ENVKREDTYEVKTDDKKS---NKIETSGIIENVEREETIEPELSDTLSDAVPI 104
N N + +N E+ YE K+ DK S +K+ + +E + P +++T+S++ I
Sbjct: 215 NNNNHHSDNSISENNYEFKSRDKASLSDSKMTLQQMAAVSSNQEPVAPNVANTMSNSSII 274
Query: 103 N 101
N
Sbjct: 275 N 275
>AY069358-1|AAL39503.1| 532|Drosophila melanogaster LD06275p
protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -1
Query: 250 NVKREDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPITNNHI 71
N D EV+ ++ K E ++N+E+EET EPE T + P N D + +
Sbjct: 346 NAFASDEEEVEEEEVKEKVKEKEAEVDNLEKEET-EPE--STTKPSTPEN--DSLKETKL 400
Query: 70 NLKPD 56
+P+
Sbjct: 401 PAQPE 405
>AE014297-2565|AAF55582.1| 726|Drosophila melanogaster CG7706-PA
protein.
Length = 726
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -1
Query: 250 NVKREDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPITNNHI 71
N D EV+ ++ K E ++N+E+EET EPE T + P N D + +
Sbjct: 540 NAFASDEEEVEEEEVKEKVKEKEAEVDNLEKEET-EPE--STTKPSTPEN--DSLKETKL 594
Query: 70 NLKPD 56
+P+
Sbjct: 595 PAQPE 599
>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p protein.
Length = 1020
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 387 SVGKNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETS 262
+V K+E+ +DE+M+ + EK++ K DKE + TS
Sbjct: 880 AVKKDEEAKADEKMVTDEKPKKKDEKEKKKEEDKEKEAAGTS 921
>AY069503-1|AAL39648.1| 630|Drosophila melanogaster LD22648p
protein.
Length = 630
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 387 SVGKNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETS 262
+V K+E+ +DE+M+ + EK++ K DKE + TS
Sbjct: 490 AVKKDEEAKADEKMVTDEKPKKKDEKEKKKEEDKEKEAAGTS 531
>AY051479-1|AAK92903.1| 565|Drosophila melanogaster GH14206p
protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 235 DTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPITNNHINLKPD 56
D + +TD KKS++ S I E + T +A+PI+V+D H+
Sbjct: 353 DIHRTETDLKKSDEERVSLIAELDSSPDEWSSTWQSTYENALPIDVID-FKEQHLQQNQS 411
Query: 55 N 53
N
Sbjct: 412 N 412
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple
ankyrin repeat singleKH domain protein protein.
Length = 4001
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -2
Query: 378 KNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSL 199
+ E+ + DE+ I + + A + +E+ D+E D E S N K + + +++
Sbjct: 452 EGEEEEEDEEEIDVLQDNDADD-EEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAA 510
Query: 198 IKSKLPVL 175
K PVL
Sbjct: 511 ANEKAPVL 518
>AF312231-1|AAG33625.1| 946|Drosophila melanogaster proteosome
subunit RPN2 protein.
Length = 946
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 387 SVGKNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETS 262
+V K+E+ +DE+M+ + EK++ K DKE + TS
Sbjct: 806 AVKKDEEAKADEKMVTDEKPKKKDEKEKKKEEDKEKEAAGTS 847
>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p110 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 387 SVGKNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETS 262
+V K+E+ +DE+M+ + EK++ K DKE + TS
Sbjct: 880 AVKKDEEAKADEKMVTDEKPKKKDEKEKKKEEDKEKEAAGTS 921
>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
protein.
Length = 1020
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 387 SVGKNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETS 262
+V K+E+ +DE+M+ + EK++ K DKE + TS
Sbjct: 880 AVKKDEEAKADEKMVTDEKPKKKDEKEKKKEEDKEKEAAGTS 921
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -2
Query: 378 KNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSL 199
+ E+ + DE+ I + + A + +E+ D+E D E S N K + + +++
Sbjct: 452 EGEEEEEDEEEIDVLQDNDADD-EEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAA 510
Query: 198 IKSKLPVL 175
K PVL
Sbjct: 511 ANEKAPVL 518
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -2
Query: 378 KNEKIDSDEQMIGIAANLQATEKDEVKTGDKESDKIETSGIERM*NVKTHTKLKQTIKSL 199
+ E+ + DE+ I + + A + +E+ D+E D E S N K + + +++
Sbjct: 452 EGEEEEEDEEEIDVLQDNDADD-EEIDDEDEEEDAPEVSSFLLDANNKRSSNISALLEAA 510
Query: 198 IKSKLPVL 175
K PVL
Sbjct: 511 ANEKAPVL 518
>AE014134-700|AAF51041.2| 565|Drosophila melanogaster CG2955-PA
protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 235 DTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPITNNHINLKPD 56
D + +TD KKS++ S I E + T +A+PI+V+D H+
Sbjct: 353 DIHRTETDLKKSDEERVSLIAELDSSPDEWSSTWQSTYENALPIDVID-FKEQHLQQNQS 411
Query: 55 N 53
N
Sbjct: 412 N 412
>BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p
protein.
Length = 634
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 235 DTYEVKTDDKKSNKIETSGIIENVEREETIEPELS 131
+TYE+ + + +ET +E++E E + ++S
Sbjct: 277 ETYEIVQHNPQKEPVETKDTVESIESNEDTQEDIS 311
>BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p
protein.
Length = 634
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 235 DTYEVKTDDKKSNKIETSGIIENVEREETIEPELS 131
+TYE+ + + +ET +E++E E + ++S
Sbjct: 277 ETYEIVQHNPQKEPVETKDTVESIESNEDTQEDIS 311
>AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA
protein.
Length = 634
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 235 DTYEVKTDDKKSNKIETSGIIENVEREETIEPELS 131
+TYE+ + + +ET +E++E E + ++S
Sbjct: 277 ETYEIVQHNPQKEPVETKDTVESIESNEDTQEDIS 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,420,908
Number of Sequences: 53049
Number of extensions: 240901
Number of successful extensions: 1287
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -