Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0422.Seq
         (400 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    63   2e-09
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.006
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.29 
UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein P0459B...    36   0.39 
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p...    32   3.6  
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    32   3.6  
UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3; ...    32   3.6  
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j...    31   6.3  
UniRef50_Q856E1 Cluster: Gp31; n=1; Mycobacterium phage Barnyard...    31   8.3  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 63.3 bits (147), Expect = 2e-09
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +1

Query: 55  PY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 213
           P  G+TANGS+ Q WFLRS+  TWITV ILELIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.006
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +3

Query: 120 YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 212
           YLDNCGNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497



 Score = 31.5 bits (68), Expect = 6.3
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 11  ICLSQRLSHACLS 49
           ICLSQRLSHACLS
Sbjct: 430 ICLSQRLSHACLS 442


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.29
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 306 MSALSTFDGSFCDYHG 353
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein
           P0459B01.16; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0459B01.16 - Oryza sativa subsp. japonica (Rice)
          Length = 172

 Score = 35.5 bits (78), Expect = 0.39
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   PVVICLSQRLSHACLS 49
           PVVICLSQRLSHAC S
Sbjct: 155 PVVICLSQRLSHACAS 170


>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 507

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 112 YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 231
           YS T + VV+ EL+    T+ SD  +A I + P+DG  R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178


>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
           protein sorting protein 36 (ELL-associated protein of 45
           kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Vacuolar protein sorting protein
           36 (ELL-associated protein of 45 kDa), partial -
           Strongylocentrotus purpuratus
          Length = 349

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 369 PVTRDNHGSRRNYHRKLIRQTFERCVA 289
           PVTR+ HGS   YH +L +Q  E  +A
Sbjct: 190 PVTRETHGSGLKYHEELAKQLSEALIA 216


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 398 APSPESNPDSPLPVTTMVVAETTIES 321
           APSPESN +SPLPV  M+     I+S
Sbjct: 377 APSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 775

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 173 PVMG*VLLLDQNQSTEGLASEVVNFDELDNFCRSHGQVP 289
           P+M  +L L Q+  T G AS V+ FD   ++CR H  +P
Sbjct: 85  PIMLGMLWLKQHDPTIGFASHVITFD--SDYCRRHCNMP 121


>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07011 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 101

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 123 LDNCGNSRANTCNQNSDQ*WDECFY*IKTNR 215
           +DNC NSRANTC ++  +     F   +TNR
Sbjct: 1   MDNCSNSRANTCLESLTRKGTGAFIRTETNR 31


>UniRef50_Q856E1 Cluster: Gp31; n=1; Mycobacterium phage
           Barnyard|Rep: Gp31 - Mycobacterium phage Barnyard
          Length = 203

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +3

Query: 213 RRRASRPKSLILMNWITFADRMVKYRRRIFQMSALSTF 326
           R  A+R K LI ++W+ + DRM  +   IF+   LSTF
Sbjct: 129 RDEAARQKGLIYVDWLPWDDRMELF-AVIFETEGLSTF 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,312,449
Number of Sequences: 1657284
Number of extensions: 7072788
Number of successful extensions: 15726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15726
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)