Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0418.Seq
         (403 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +3

Query: 117 VFYKVLXHYFILSSIVFAGHAM*RIFLGNFFTLWV 221
           +F+ +  +YF  + I+F  H +  + + +FF  ++
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI 174


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 144 NNVLRLCRTHYYLQKASRQHMSNY--YSCAAISVLLFKIIKQ 25
           +N+  LCR HY L    ++  S +      +I V LF ++ Q
Sbjct: 228 DNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQ 269


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 144 NNVLRLCRTHYYLQKASRQHMSNY--YSCAAISVLLFKIIKQ 25
           +N+  LCR HY L    ++  S +      +I V LF ++ Q
Sbjct: 228 DNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQ 269


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 141 NVLRLCRTHYYLQKASRQHMSNYY 70
           NV +  R  YY    S  ++ N+Y
Sbjct: 346 NVAKKIRNFYYGGPNSENNLDNFY 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,098
Number of Sequences: 336
Number of extensions: 1711
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)