Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0418.Seq
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    26   0.59 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   2.4  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 25.8 bits (54), Expect = 0.59
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 114 YYLQKASRQHMSNYYSCAAISVL 46
           Y L++ ++Q +SNY+ CA    L
Sbjct: 97  YELEQHTKQSLSNYFRCAGAGTL 119


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 224 CNPKCKKITQKYSLHRVPCE 165
           C+P+CKK T  Y  H   C+
Sbjct: 639 CHPRCKKCT-GYGFHEQFCQ 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,882
Number of Sequences: 2352
Number of extensions: 6087
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)