Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0418.Seq
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p pro...    27   9.4  
AY058740-1|AAL13969.1|  504|Drosophila melanogaster LP04889p pro...    27   9.4  
AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-P...    27   9.4  
AE014296-2975|AAF49294.1|  504|Drosophila melanogaster CG7430-PA...    27   9.4  

>AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p
           protein.
          Length = 1470

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 162 LLMIE*NNVLRLCRTHYYLQKASRQHMSNYYSCAAISV 49
           LL+I      RL   H  +Q  +  HM NYY     S+
Sbjct: 560 LLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSI 597


>AY058740-1|AAL13969.1|  504|Drosophila melanogaster LP04889p
           protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 129 LCRTHYYLQKASRQHMSNYYSCAAISVLLFKIIKQRSNIVE 7
           L  +HYY    S        SC ++S+ L K++ Q+SN V+
Sbjct: 88  LNNSHYYHMAHSGDLEKRGISCGSVSLDLEKLMGQKSNAVK 128


>AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-PA
           protein.
          Length = 1470

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 162 LLMIE*NNVLRLCRTHYYLQKASRQHMSNYYSCAAISV 49
           LL+I      RL   H  +Q  +  HM NYY     S+
Sbjct: 560 LLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSI 597


>AE014296-2975|AAF49294.1|  504|Drosophila melanogaster CG7430-PA
           protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 129 LCRTHYYLQKASRQHMSNYYSCAAISVLLFKIIKQRSNIVE 7
           L  +HYY    S        SC ++S+ L K++ Q+SN V+
Sbjct: 88  LNNSHYYHMAHSGDLEKRGISCGSVSLDLEKLMGQKSNAVK 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,632
Number of Sequences: 53049
Number of extensions: 249875
Number of successful extensions: 336
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)