Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0418.Seq
(403 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 2.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 2.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 2.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 2.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 2.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 2.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 6.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 6.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 6.9
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 190 YFWVIFLHFGLHYWS 234
+F ++F F L YWS
Sbjct: 422 FFPIVFAFFNLAYWS 436
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 190 YFWVIFLHFGLHYWS 234
+F ++F F L YWS
Sbjct: 422 FFPIVFAFFNLAYWS 436
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 101 NNNNYNNNCKKLYYNINYI 119
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 235 NSNNVTQSVKKLPKNILYI 179
N+NN + KKL NI YI
Sbjct: 98 NNNNNYNNYKKLYYNINYI 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,746
Number of Sequences: 438
Number of extensions: 1750
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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