Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0417.Seq
(405 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 153 2e-37
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 151 9e-37
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 146 3e-35
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 111 9e-25
AK125508-1|BAC86186.1| 166|Homo sapiens protein ( Homo sapiens ... 31 1.5
AK126845-1|BAC86719.1| 172|Homo sapiens protein ( Homo sapiens ... 29 4.5
AK123335-1|BAC85582.1| 172|Homo sapiens PTPRF), interacting pro... 29 4.5
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 153 bits (371), Expect = 2e-37
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 96.7 bits (230), Expect = 3e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 151 bits (366), Expect = 9e-37
Identities = 73/84 (86%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 95.9 bits (228), Expect = 5e-20
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKDP+RLFEGNAL RRLVR+GVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDEKDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 146 bits (353), Expect = 3e-35
Identities = 68/83 (81%), Positives = 73/83 (87%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGGGAANDEEED 6
GRVKRKN +KGQGG A D +E+
Sbjct: 171 GRVKRKNAKKGQGGAGAGDHKEE 193
Score = 89.0 bits (211), Expect = 5e-18
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL++KDP+RLFEGNAL RLV IGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 61 LTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 111 bits (267), Expect = 9e-25
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXG 81
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+G G
Sbjct: 50 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
Score = 87.0 bits (206), Expect = 2e-17
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -3
Query: 388 KDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
+DP+RLFEGNAL RRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 56
>AK125508-1|BAC86186.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ43520 fis, clone PLACE5000001. ).
Length = 166
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 324 WMKNR*NSIMCLV*RLRTSWSVVSDAGVQSW-PGEVHPSCQNFDPAKAYSCPQASCEHPI 148
W++NR + + L W+ +G QSW PG P +++PA + PQA E +
Sbjct: 68 WLRNRVRAGV-----LSRGWAREPGSGRQSWCPGGGGPGRLHWEPAPGWGVPQAYREQTL 122
Query: 147 IYCAPGLWQA 118
+ GL A
Sbjct: 123 LLRRGGLQPA 132
>AK126845-1|BAC86719.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ44897 fis, clone BRAMY3002329. ).
Length = 172
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 270 SWSVVSDAGVQSWPGEVHPSCQNF 199
SW+ SD+GV +W G V C F
Sbjct: 15 SWTCPSDSGVAAWAGSVTLGCYTF 38
>AK123335-1|BAC85582.1| 172|Homo sapiens PTPRF), interacting
protein (liprin), alpha 1 protein.
Length = 172
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 270 SWSVVSDAGVQSWPGEVHPSCQNF 199
SW+ SD+GV +W G V C F
Sbjct: 15 SWTCPSDSGVAAWAGSVTLGCYTF 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,143,285
Number of Sequences: 237096
Number of extensions: 1357234
Number of successful extensions: 2733
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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