Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0417.Seq
(405 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 152 2e-37
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 152 2e-37
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 95 4e-20
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 95 4e-20
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 69 3e-12
AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p pro... 29 2.4
AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precurs... 29 2.4
AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA... 29 2.4
AY094729-1|AAM11082.1| 723|Drosophila melanogaster GH24458p pro... 28 5.4
BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p pro... 27 9.5
BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p pro... 27 9.5
AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p pro... 27 9.5
AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-P... 27 9.5
AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-P... 27 9.5
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA... 27 9.5
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 27 9.5
AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA... 27 9.5
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 152 bits (368), Expect = 2e-37
Identities = 73/84 (86%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFG GRP
Sbjct: 112 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRP 171
Query: 74 GRVKRKNLRKGQ-GGGAANDEEED 6
GRVKRKNL+K Q GGG A +EEED
Sbjct: 172 GRVKRKNLKKNQGGGGGAAEEEED 195
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKD KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRL+ + KL
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKL 118
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 152 bits (368), Expect = 2e-37
Identities = 73/84 (86%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGXGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFG GRP
Sbjct: 112 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRP 171
Query: 74 GRVKRKNLRKGQ-GGGAANDEEED 6
GRVKRKNL+K Q GGG A +EEED
Sbjct: 172 GRVKRKNLKKNQGGGGGAAEEEED 195
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKD KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRL+ + KL
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKL 118
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKD KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRL+ + KL
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKL 118
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIR 177
QTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 112 QTQVFKLGLAKSIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/57 (80%), Positives = 51/57 (89%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
LTL+EKD KRLF+GNAL RRLVRIGVLDE +MKLDYVLGLKIEDFLERRL+ + KL
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKL 118
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIR 177
QTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 112 QTQVFKLGLAKSIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 68.5 bits (160), Expect = 3e-12
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -2
Query: 308 ETRLCAWSED*GLLGASSQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLD 129
E RL A SED GLLGASS +AGLAKSIHHAR+LIRQR + + IPSF+V
Sbjct: 92 EARLRAGSEDSGLLGASSADAGVQAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTPG 151
Query: 128 SGKHI-DFSLKSPFGXGRPGRVKRK 57
+ +FSLK P RP R +++
Sbjct: 152 LPEATSNFSLKMPL-RTRPSRSRQE 175
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 403 LTLEEKDPKRLFEGNALXRRLVRIGVL 323
LTL+EKD KRLF+G +L RRLVRIGVL
Sbjct: 61 LTLDEKDAKRLFQGKSLVRRLVRIGVL 87
>AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p
protein.
Length = 258
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 252 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 166
DA V W +V P C+N + A +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158
>AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precursor
protein.
Length = 218
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 252 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 166
DA V W +V P C+N + A +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158
>AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA
protein.
Length = 258
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 252 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 166
DA V W +V P C+N + A +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158
>AY094729-1|AAM11082.1| 723|Drosophila melanogaster GH24458p
protein.
Length = 723
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 271 SPQSSDQAHNRVSSVFHPVLQYEPDDVXGHYLRTIS 378
SP S N S HP+ ++ P V H +T+S
Sbjct: 299 SPASDSYDSNSPSVAAHPIRKFNPGTVYTHVYKTVS 334
>BT012441-1|AAS93712.1| 1423|Drosophila melanogaster RH07858p protein.
Length = 1423
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 271 SPQSSDQAHNRVSSVFHPVLQYEPDDVXGHYLRTIS 378
SP S N S HP+ ++ P V H +T+S
Sbjct: 999 SPASDAYDSNSPSVAAHPIRKFNPGTVYTHVYKTVS 1034
>BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p
protein.
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 170 CGHEYAFAGSKFWHD 214
CGHE+ FA + WH+
Sbjct: 251 CGHEFCFACGENWHE 265
>AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p
protein.
Length = 1050
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 131 DSGKHIDFSLKSPFGXGR-PGRVKRKNL-RKGQGGGAANDEEED 6
DS + ++ SL++P G P V +N R+GQG GAA+ E ++
Sbjct: 505 DSPQTLNESLQAPSEVGEVPHSVHLENSPRRGQGDGAASSEMQN 548
>AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-PB,
isoform B protein.
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 170 CGHEYAFAGSKFWHD 214
CGHE+ FA + WH+
Sbjct: 251 CGHEFCFACGENWHE 265
>AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-PA,
isoform A protein.
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 170 CGHEYAFAGSKFWHD 214
CGHE+ FA + WH+
Sbjct: 251 CGHEFCFACGENWHE 265
>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
protein.
Length = 1978
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 131 DSGKHIDFSLKSPFGXGR-PGRVKRKNL-RKGQGGGAANDEEED 6
DS + ++ SL++P G P V +N R+GQG GAA+ E ++
Sbjct: 505 DSPQTLNESLQAPSEVGEVPHSVHLENSPRRGQGDGAASSEMQN 548
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = -1
Query: 213 SCQNFDPAKAYSC-PQASC----EHPIIYCAPG 130
+C N A +C P A C HPI YC PG
Sbjct: 21737 ACINTQCASPCNCGPNAECTVKNHHPICYCKPG 21769
>AE013599-3832|AAF47176.3| 1423|Drosophila melanogaster CG3328-PA
protein.
Length = 1423
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 271 SPQSSDQAHNRVSSVFHPVLQYEPDDVXGHYLRTIS 378
SP S N S HP+ ++ P V H +T+S
Sbjct: 999 SPASDAYDSNSPSVAAHPIRKFNPGTVYTHVYKTVS 1034
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,416,460
Number of Sequences: 53049
Number of extensions: 394111
Number of successful extensions: 1149
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -