Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0416.Seq
(407 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 0.46
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 3.2
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 5.7
AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding pr... 23 5.7
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 5.7
AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein. 22 9.9
AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding pr... 22 9.9
AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative odorant-b... 22 9.9
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 9.9
AF533512-1|AAM97673.1| 200|Anopheles gambiae odorant binding pr... 22 9.9
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 0.46
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 PXPCPLRRFFLLTRPGRPP-PNGDFXEKSMCL 123
P P +R LL +PG+PP NG + + +C+
Sbjct: 533 PAPWKRQRLVLLPKPGKPPGSNGSY--RPLCM 562
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.4 bits (48), Expect = 3.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 31 PXPCPLRRFFLLTRPGRPP 87
P P ++ LL +PG+PP
Sbjct: 446 PIPWKRQKLVLLPKPGKPP 464
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 22.6 bits (46), Expect = 5.7
Identities = 14/61 (22%), Positives = 19/61 (31%)
Frame = +2
Query: 17 HHWRLRHPVPCGGSSS*HVQDDLHRMEISXRSQCACQSPGAQ*MMGCSQLACGHEYAFAG 196
HH H P GG SS +D S Q C ++ H+ G
Sbjct: 161 HHHHHHHNAPAGGESSTSEKDSSRESSKSPMLMKMLTDKQEQTCQWCRKVIPSHQTGILG 220
Query: 197 S 199
+
Sbjct: 221 T 221
>AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding
protein AgamOBP38 protein.
Length = 336
Score = 22.6 bits (46), Expect = 5.7
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = +1
Query: 61 LLTRPGRPPPNGDFXEKSMCLPESRRTINDGMFTTCLRTRICL 189
L+ P P G +++ + + DG TC+RT L
Sbjct: 139 LIAHPAYVAPCGQEIRRAVSDCATMLQVEDGQLQTCVRTETFL 181
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 22.6 bits (46), Expect = 5.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 31 PXPCPLRRFFLLTRPGRPP 87
P ++R LL +PG+PP
Sbjct: 486 PAHWKIQRLVLLQKPGKPP 504
>AY604022-1|AAT38516.1| 172|Anopheles gambiae LZ3788P protein.
Length = 172
Score = 21.8 bits (44), Expect = 9.9
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +1
Query: 118 CLPESRRTINDGMFTTCLRTRICLCRIKILA*WMDFARPALNTC 249
C + DGM +++ + +K WM R A N C
Sbjct: 59 CAMNATNMYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNAC 102
>AY330175-1|AAQ16281.1| 200|Anopheles gambiae odorant-binding
protein AgamOBP48 protein.
Length = 200
Score = 21.8 bits (44), Expect = 9.9
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +1
Query: 118 CLPESRRTINDGMFTTCLRTRICLCRIKILA*WMDFARPALNTC 249
C + DGM +++ + +K WM R A N C
Sbjct: 87 CAMNATNMYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNAC 130
>AJ618919-1|CAF01998.1| 200|Anopheles gambiae putative
odorant-binding protein OBP3788 protein.
Length = 200
Score = 21.8 bits (44), Expect = 9.9
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +1
Query: 118 CLPESRRTINDGMFTTCLRTRICLCRIKILA*WMDFARPALNTC 249
C + DGM +++ + +K WM R A N C
Sbjct: 87 CAMNATNMYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNAC 130
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 21.8 bits (44), Expect = 9.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 406 SSPSRRRTPRDCSKVMP 356
+SPS RR P D ++V P
Sbjct: 21 TSPSYRRLPNDETRVHP 37
>AF533512-1|AAM97673.1| 200|Anopheles gambiae odorant binding
protein-8 protein.
Length = 200
Score = 21.8 bits (44), Expect = 9.9
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +1
Query: 118 CLPESRRTINDGMFTTCLRTRICLCRIKILA*WMDFARPALNTC 249
C + DGM +++ + +K WM R A N C
Sbjct: 87 CAMNATNMYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNAC 130
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,985
Number of Sequences: 2352
Number of extensions: 8411
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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