Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0416.Seq
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 164 9e-41
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 159 4e-39
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 156 2e-38
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 121 1e-27
AF321918-2|AAK09396.1| 333|Homo sapiens acid phosphatase varian... 38 0.017
AF321918-1|AAK09393.1| 426|Homo sapiens acid phosphatase protein. 38 0.017
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 31 2.0
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 29 6.0
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 29 6.0
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 29 6.0
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 29 6.0
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 29 6.0
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 29 6.0
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 29 8.0
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 164 bits (399), Expect = 9e-41
Identities = 86/133 (64%), Positives = 94/133 (70%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRIGVLDEGKMKLDYILGLKIEDF 105
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 159 bits (385), Expect = 4e-39
Identities = 85/133 (63%), Positives = 92/133 (69%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL+EKDP+RLFEGNALLR + L QTQVFK GL
Sbjct: 60 LLTLDEKDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP G GRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDDEE 192
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -2
Query: 346 RLVRIGVLDEKQMKLDYVLGLKIEDF 269
RLVR+GVLDE +MKLDY+LGLKIEDF
Sbjct: 80 RLVRLGVLDEGKMKLDYILGLKIEDF 105
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 156 bits (379), Expect = 2e-38
Identities = 83/133 (62%), Positives = 91/133 (68%)
Frame = -1
Query: 407 VLTLEEKDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGL 228
+LTL++KDP+RLFEGNALL + L QTQVFK GL
Sbjct: 60 LLTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGL 119
Query: 227 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGGRPGRVKRKNLR 48
AKSIHHAR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFS SP+GGGRPGRVKRKN +
Sbjct: 120 AKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAK 179
Query: 47 KGQGXGAANDXXE 9
KGQG A D E
Sbjct: 180 KGQGGAGAGDHKE 192
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -2
Query: 391 RRTPRDCSKVMPFYGRLVRIGVLDEKQMKLDYVLGLKIEDF 269
++ PR + RLV IGVLDE +MKLDY+LGLKIEDF
Sbjct: 65 QKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDF 105
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 121 bits (291), Expect = 1e-27
Identities = 65/103 (63%), Positives = 71/103 (68%)
Frame = -1
Query: 389 KDPKRLFEGNALLRSSGSYWSTG*KTDETRLCAWSXD*GLLXASSQTQVFKAGLAKSIHH 210
+DP+RLFEGNALLR + L QTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 209 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSXKSPFGGG 81
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFS +SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -2
Query: 391 RRTPRDCSKVMPFYGRLVRIGVLDEKQMKLDYVLGLKIEDF 269
R PR + RLVRIGVLDE +MKLDY+LGLKIEDF
Sbjct: 4 REDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDF 44
>AF321918-2|AAK09396.1| 333|Homo sapiens acid phosphatase variant 3
protein.
Length = 333
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 31 PXPCPLRRFFLLTRPGRPPPNG 96
P PCPL RF+ LT P RPP +G
Sbjct: 261 PAPCPLGRFYQLTAPARPPAHG 282
>AF321918-1|AAK09393.1| 426|Homo sapiens acid phosphatase protein.
Length = 426
Score = 37.5 bits (83), Expect = 0.017
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 31 PXPCPLRRFFLLTRPGRPPPNG 96
P PCPL RF+ LT P RPP +G
Sbjct: 354 PAPCPLGRFYQLTAPARPPAHG 375
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 183 YSCPQASCEHPIIYCAPGLWQAH*LLXEISIRWRSSWTCQ 64
+SCP A P+ + PG W +S W +W CQ
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -3
Query: 213 SCQNFDPAKAYSCPQASCEHP-IIYCAPGLWQAH*LLXEISIRWRSSWTCQEEEPPQGTG 37
SC NFD + C S H IYC G L +++ W C+ + P G
Sbjct: 173 SCMNFDGG--FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLN 230
Query: 36 XR 31
R
Sbjct: 231 GR 232
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1
Query: 407 VLTLEEKDPKRLFE 366
+LTL+EKDP+RLFE
Sbjct: 51 LLTLDEKDPRRLFE 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,466,672
Number of Sequences: 237096
Number of extensions: 1430939
Number of successful extensions: 2745
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2744
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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