Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0413.Seq
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 112 9e-26
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 111 3e-25
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 8e-24
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 94 4e-20
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 87 4e-18
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 81 3e-16
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 80 8e-16
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 69 1e-12
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 61 3e-10
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 55 2e-08
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 52 2e-07
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 47 5e-06
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 46 9e-06
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 9e-06
SB_214| Best HMM Match : Arf (HMM E-Value=0) 46 9e-06
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 42 1e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 38 0.002
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.010
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 36 0.010
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 36 0.010
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.022
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 35 0.029
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.051
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.051
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 33 0.067
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 33 0.067
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 33 0.12
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 33 0.12
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 32 0.15
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 32 0.15
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 31 0.27
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 31 0.36
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 30 0.62
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 30 0.82
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 1.4
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 1.4
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 1.9
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) 29 1.9
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 28 2.5
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_53623| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 28 3.3
SB_40476| Best HMM Match : zf-AN1 (HMM E-Value=5.9e-05) 27 4.4
SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08) 27 4.4
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 27 5.8
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 27 5.8
SB_34614| Best HMM Match : FMO-like (HMM E-Value=0) 27 5.8
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 112 bits (270), Expect = 9e-26
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEA
Sbjct: 54 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEA 103
Score = 103 bits (248), Expect = 4e-23
Identities = 50/53 (94%), Positives = 50/53 (94%)
Frame = +1
Query: 97 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 53
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 111 bits (266), Expect = 3e-25
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA
Sbjct: 503 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEA 552
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 106 bits (254), Expect = 8e-24
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
E+VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E+
Sbjct: 54 ESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNES 103
Score = 93.1 bits (221), Expect = 8e-20
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +1
Query: 97 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVRQ*NTKT 276
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV K
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKN 60
Query: 277 L 279
+
Sbjct: 61 I 61
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 93.9 bits (223), Expect = 4e-20
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
E VEYKNI FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA
Sbjct: 127 EVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEA 176
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = +1
Query: 94 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIPTIGFNV
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNV 126
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 87.4 bits (207), Expect = 4e-18
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
ETV YKNISFTVWD+GGQDKIR LWR Y+Q QG+IFVVDS DRER EA
Sbjct: 33 ETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEA 82
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1
Query: 160 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
M+GLD AGKTTILY+LKL E+V+T+PT+GFNV
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNV 32
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 81.0 bits (191), Expect = 3e-16
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
KN++ T+WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D R+ EA
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEA 106
Score = 70.5 bits (165), Expect = 5e-13
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 133 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIPTIGFNV
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNV 55
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 79.8 bits (188), Expect = 8e-16
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 401
KNI+F+VWD+GGQDKIR LWRHYFQ +G+IFVVDS D+ERI E
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFE 195
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 184 KTTILYKLKLGEIVTTIPTIGFNV 255
KTTILYKLKL E V T+PT+ FNV
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNV 145
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 68.9 bits (161), Expect = 1e-12
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 294 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EA
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEA 179
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = -3
Query: 401 LADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVF 270
L +T PI T+Y ED L +M PQ +DFVL+SNI K ++
Sbjct: 81 LINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLY 124
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 61.3 bits (142), Expect = 3e-10
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 353
ETVE++++ FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 226 ETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +3
Query: 288 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 401
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ +
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLAD 43
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 ETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
ET+ +K I F VWD+GG+++ RPLW+ Y + T +I+VVDS ++ EA
Sbjct: 58 ETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEA 108
Score = 51.6 bits (118), Expect = 2e-07
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Frame = +1
Query: 97 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+PT FNV
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNV 57
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 52.0 bits (119), Expect = 2e-07
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRERIGEA 404
KN+ F VWD+GGQ +R +HYF + GLI+VVDS D +R+ EA
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA 58
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +3
Query: 252 CETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
C T + N++ +W++GG +K R W ++ +TQ L++VVDS+D +R E+
Sbjct: 207 CLTTDGLNLN--IWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNES 255
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEI---VTTIPTIGFNV 255
E RIL++GLD +GK+ L L G+ +T T GFNV
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNV 205
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 47.2 bits (107), Expect = 5e-06
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 297 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 398
+ GQ IRP WR Y+ NT +I+VVDS D++RIG
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIG 186
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 46.4 bits (105), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 121 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVRQ 261
FK LF K+EM + +VGL +GKTT + + G+ IPT+GFN+R+
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK 59
Score = 44.8 bits (101), Expect = 3e-05
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +3
Query: 273 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
N++ VWD+GGQ + R +W Y + ++++VD+ D +++
Sbjct: 64 NVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKL 104
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVRQ*NTK 273
+EMRIL++GLD +GKTTIL L +++ PT GFN++ +K
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSK 59
Score = 44.0 bits (99), Expect = 5e-05
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 288 VWDVGGQDKIRPLWRHYFQNT 350
VWD+GGQ KIRP W++YF+NT
Sbjct: 66 VWDIGGQRKIRPYWKNYFENT 86
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 46.4 bits (105), Expect = 9e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 255 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
E + + FT +D+GG + R +W+ YF G++F++D D ER+ E+
Sbjct: 13 EELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAES 62
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 258 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
TVE +WD GQ++ R L Y++ QG+I V D+N RE
Sbjct: 51 TVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRE 94
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 42.3 bits (95), Expect = 1e-04
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 258 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
TV+ K I +WD GQ++ R L Y+++ G++ + D N+ E
Sbjct: 51 TVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESE 94
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +1
Query: 91 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 210
F+M + + L+K LF K E IL++GLD AGKTT+L ++K
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
Score = 28.3 bits (60), Expect = 2.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLW 329
+ ++ WD+GGQ ++R LW
Sbjct: 68 ITISHVKLMFWDLGGQQELRTLW 90
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
K I +WD GQ++ R + Y++ G+I V D D+E
Sbjct: 76 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQE 115
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 38.3 bits (85), Expect = 0.002
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
K++ +WD GQ++ R + R Y++ G + V D + RE
Sbjct: 142 KSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRE 181
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 36.3 bits (80), Expect = 0.010
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 371
+YK + F ++DVGGQ R W H F++ +I+ V
Sbjct: 239 DYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 274
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 36.3 bits (80), Expect = 0.010
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
I +WD GQ++ R + Y++NT G + + D +R+
Sbjct: 63 IKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRD 100
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 36.3 bits (80), Expect = 0.010
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 371
+YK + F ++DVGGQ R W H F++ +I+ V
Sbjct: 191 DYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 226
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 35.5 bits (78), Expect = 0.017
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
V+ + + +WD GQ++ R + + Y+ N G+I D +++
Sbjct: 51 VDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKK 93
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = -3
Query: 275 VFVFYCLTLKPIVGIVVTISPNLSLYRIVV--LPAASKPTINILISFLP-KRPLNKFANI 105
+ +FY TL+P++ IV+ + L + RIV+ LP P + I+I +LP RP+ +
Sbjct: 234 IAIFYLPTLRPVMRIVIYLPTLLPVMRIVIFYLPTL-LPVMRIVICYLPILRPVMRIVIY 292
Query: 104 FPIL 93
P L
Sbjct: 293 LPTL 296
Score = 33.1 bits (72), Expect = 0.089
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = -3
Query: 353 LCILEIMPPQWSDFV-LASNIPHSKTNVFVFYCLTLKPIVGIVVTISPNL-SLYRIVVLP 180
+C L I+ P + L + +P + + +FY TL+P++ IV+ P L + RIV+
Sbjct: 277 ICYLPILRPVMRIVIYLPTLLPVMR--IAIFYLPTLRPVMRIVIFYLPILRPVMRIVIYL 334
Query: 179 AASKPTINILISFLPK-RPLNKFANIF-PIL 93
P + I +LP RP+ + + PIL
Sbjct: 335 PTLLPVMRIATFYLPTLRPVMRIVIFYLPIL 365
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = -3
Query: 275 VFVFYCLTLKPIVGIVVTISPNL-SLYRIVV--LPAASKPTINILISFLP 135
+ +FY TL+P++ IV+ P L + RI + LP +P + I+I +LP
Sbjct: 206 IAIFYLPTLRPVMRIVIFYLPTLRPVMRIAIFYLPTL-RPVMRIVI-YLP 253
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 35.1 bits (77), Expect = 0.022
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 267 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 371
+K++ F ++DVGGQ R W H F+ +IF V
Sbjct: 191 FKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 225
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 34.7 bits (76), Expect = 0.029
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
++ + + +WD GQ++ R + Y++ T G+I V D
Sbjct: 21 IDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYD 58
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 33.9 bits (74), Expect = 0.051
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+ + I F + DVGGQ R W H F+N ++F+V ++ +++
Sbjct: 189 DLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQV 232
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 33.9 bits (74), Expect = 0.051
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 386
+ WD GQ+K R + + Y++N +I V D +R
Sbjct: 60 VKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNR 96
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 33.5 bits (73), Expect = 0.067
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
V+ K + +WD GQ++ R + + YF+ G++ + D
Sbjct: 486 VDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYD 523
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 33.5 bits (73), Expect = 0.067
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 389
K + +WD GQ++ R + Y++ G I + D + E
Sbjct: 68 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
VE K I VWD GQ++ R + Y++ G + V D
Sbjct: 56 VEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYD 93
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 32.7 bits (71), Expect = 0.12
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
I+ +WD GQ++ R + + YF+ G++ D
Sbjct: 945 IAIQLWDTAGQERFRSITKQYFRKADGILIFYD 977
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
+ F +WD GQ++ L Y++ Q I V D +++ A
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARA 112
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 32.3 bits (70), Expect = 0.15
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
+++ +WD GQ++ R + + Y+++ G+I D
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 31.5 bits (68), Expect = 0.27
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
K I +WD GQ++ + Y++ G++ V D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
+ I +WD GQ++ R L +F++ G + V D
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFD 198
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 30.3 bits (65), Expect = 0.62
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 148 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV 255
M++++VG+ GKTT+L LK + + + T+G V
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVV 702
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.9 bits (64), Expect = 0.82
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
V K F +WD GQ++ + L Y+++ I V D
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 0.82
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 136 GKKEMRILMVGLDAAGKTTILYKLKL 213
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
K I T+ D GQ++ + YF+ QG+ V D
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFD 433
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 285 TVWDVGGQDKIRPLWRHYF 341
TV+D+GG KIR +W+ Y+
Sbjct: 7 TVYDLGGGAKIRGIWKDYY 25
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 386
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR 117
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 278 NVFVFYCLTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINILISFLPKRPLNKFANI 105
+VF ++ T+ P + + P +S + + KPTI LIS L +R + KF +
Sbjct: 448 DVFDYFARTMVPSILDKLRDDPEVS-HEAFKADHSEKPTITTLISLLGERMIKKFNTV 504
>SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22)
Length = 407
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 275 VFVFYCLTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINIL 150
+++ C+ ++PI IV + L LY I+ PA KP+ +L
Sbjct: 74 LYIVNCV-IQPIFAIVAVSTNTLVLYAIIKTPALHKPSTVLL 114
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 288 VWDVGGQDKIRPLWRHYFQNTQGLIF 365
V DVGGQ R W H+F ++F
Sbjct: 166 VIDVGGQKNQRKKWIHFFDGVTAVVF 191
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 28.3 bits (60), Expect = 2.5
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 374
+ +WD GQ++ R L Y ++++ + V D
Sbjct: 212 VRLQIWDTAGQERFRCLIHSYIRDSEAALIVFD 244
>SB_53623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = -3
Query: 383 IVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVFVFYCLTLKPIVGIVVTISPNLS 204
++ + Y D + ++ ++ P FV+ ++ H VFV + IV ++ + P+L
Sbjct: 113 VIPLVYPDLIVFVIPLVYPDLIVFVIPLSLVHPDLIVFVIPLVNPDMIVFVIALVHPDLI 172
Query: 203 LYRI 192
++ I
Sbjct: 173 VFVI 176
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 215 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 84
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEI 222
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 311 VLASNIPHSKTNVFVFYCLTLKPIVGIVVTISPNLSLYRIVVLP-AASKPTINILISFL 138
VL S T + +F+ + + I+ I TIS N+++ ++ P A + I + + F+
Sbjct: 1346 VLLSTSVERVTIISIFFIIIIIIIIIITTTISSNITIIIFIIKPDARTNELIRVFLGFV 1404
>SB_40476| Best HMM Match : zf-AN1 (HMM E-Value=5.9e-05)
Length = 363
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -2
Query: 294 PTQ*N*CFCILLSHIKANSGNCCYNFT*FEFVQNCGFTSCIQTNHQYS 151
P Q C L+SH +C Y++ + CG + C H+Y+
Sbjct: 286 PVQLQRCLGTLISHFYKRLASCIYDWLMLYSIDRCGNSFC--ATHRYA 331
>SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08)
Length = 619
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 281 TNVFVFYCLTLKPIVGIVVTISPNLSLYRIVVL 183
TN+ + YC +L +G+ V + ++SLY + +L
Sbjct: 402 TNITLPYCYSLAIELGVTVKLLGSVSLYNVTLL 434
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 94 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKL 207
KM NMF + G KK ++L+ G AGKTT+ KL
Sbjct: 292 KMNNMF--VVDGKV-KKACKVLLEGDSGAGKTTLTKKL 326
>SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2)
Length = 393
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 94 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKL 207
KM NMF + G KK ++L+ G AGKTT+ KL
Sbjct: 302 KMNNMF--VVDGKV-KKACKVLLEGDSGAGKTTLTKKL 336
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 115 NLFKGLFGKKEMRILMVGLDAAGKTTILYKL 207
+LFK K+ R+L+ G GKTT+ KL
Sbjct: 976 DLFKSKTKKRMKRVLLEGNPGVGKTTLCKKL 1006
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 115 NLFKGLFGKKEMRILMVGLDAAGKTTILYKL 207
+LFK K+ R+L+ G GKTT+ KL
Sbjct: 163 DLFKSKTKKRMKRVLLEGNPGVGKTTLCKKL 193
>SB_34614| Best HMM Match : FMO-like (HMM E-Value=0)
Length = 475
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 212 NLSLYRIVVLPAASKPTINILISFLPKRPLNKFANI 105
+++LY+ V P SKPT+ +L F P +N ++
Sbjct: 342 DVTLYKYVFPPHLSKPTLAVLGCFQPLGAINPVVDL 377
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,553,271
Number of Sequences: 59808
Number of extensions: 292061
Number of successful extensions: 687
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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