BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0413.Seq
(406 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 36 6e-04
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 36 6e-04
AY724807-1|AAW50316.1| 127|Anopheles gambiae G protein alpha su... 36 6e-04
AY724806-1|AAW50315.1| 163|Anopheles gambiae G protein alpha su... 36 6e-04
AY724804-1|AAW50313.1| 163|Anopheles gambiae G protein alpha su... 36 6e-04
AY724808-1|AAW50317.1| 206|Anopheles gambiae G protein alpha su... 35 0.001
AY724805-1|AAW50314.1| 162|Anopheles gambiae G protein alpha su... 35 0.001
AY724803-1|AAW50312.1| 162|Anopheles gambiae G protein alpha su... 35 0.001
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 32 0.009
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 28 0.11
AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 24 2.4
AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical prote... 23 3.2
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 4.2
AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative deoxynucl... 22 7.4
AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate deo... 22 7.4
AY579078-1|AAT81602.1| 425|Anopheles gambiae neuropeptide F rec... 22 9.8
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 35.9 bits (79), Expect = 6e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 267 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 371
+K+I F ++DVGGQ R W H F+ +IF V
Sbjct: 190 FKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 224
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 35.9 bits (79), Expect = 6e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+ + I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 189 DLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 232
>AY724807-1|AAW50316.1| 127|Anopheles gambiae G protein alpha
subunit AgGq5 protein.
Length = 127
Score = 35.9 bits (79), Expect = 6e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+ + I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 3 DLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 46
>AY724806-1|AAW50315.1| 163|Anopheles gambiae G protein alpha
subunit AgGq4 protein.
Length = 163
Score = 35.9 bits (79), Expect = 6e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+ + I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 3 DLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 46
>AY724804-1|AAW50313.1| 163|Anopheles gambiae G protein alpha
subunit AgGq2 protein.
Length = 163
Score = 35.9 bits (79), Expect = 6e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 264 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+ + I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 3 DLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 46
>AY724808-1|AAW50317.1| 206|Anopheles gambiae G protein alpha
subunit AgGq6 protein.
Length = 206
Score = 35.1 bits (77), Expect = 0.001
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 273 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 49 SIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 89
>AY724805-1|AAW50314.1| 162|Anopheles gambiae G protein alpha
subunit AgGq3 protein.
Length = 162
Score = 35.1 bits (77), Expect = 0.001
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 273 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 5 SIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 45
>AY724803-1|AAW50312.1| 162|Anopheles gambiae G protein alpha
subunit AgGq1 protein.
Length = 162
Score = 35.1 bits (77), Expect = 0.001
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 273 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 395
+I F + DVGGQ R W H F+N +IF+V ++ ++I
Sbjct: 5 SIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 45
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 31.9 bits (69), Expect = 0.009
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 261 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 404
++ + F +WD GQ++ L Y++ Q I V D + + A
Sbjct: 68 IDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARA 115
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 28.3 bits (60), Expect = 0.11
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 276 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFV 368
++F ++DVGGQ R W F + +IFV
Sbjct: 206 VNFHMFDVGGQRDERRKWIQCFNDVTAIIFV 236
>AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein
protein.
Length = 814
Score = 23.8 bits (49), Expect = 2.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 270 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLI 362
+N S T+W+ G K PL+ Y+ G I
Sbjct: 204 RNFS-TIWEFEGHLKYSPLFYGYYSTFSGAI 233
>AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical protein
protein.
Length = 297
Score = 23.4 bits (48), Expect = 3.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 168 TNHQYSHFLFAKKAFK*IRKHIPHFEL 88
TN + H + + F IRKHIP +L
Sbjct: 2 TNIEQHHDVVKESFFHFIRKHIPKADL 28
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.0 bits (47), Expect = 4.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 296 CWRPRQNQTTVEALFPKYTGSNLRSRQ*RSGTYRR 400
CWR + + ++ +YT R+ ++GT RR
Sbjct: 193 CWRILSRYSYSDHVYIRYTVGEQPPREQQTGTARR 227
>AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative
deoxynucleoside kinase protein.
Length = 245
Score = 22.2 bits (45), Expect = 7.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 127 GLFGKKEMRILMVGLDAAGKTTIL 198
G GKK + + G +GKTT L
Sbjct: 10 GASGKKPFTVFVEGNIGSGKTTFL 33
>AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate
deoxyribonucleoside kinaseprotein.
Length = 246
Score = 22.2 bits (45), Expect = 7.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 127 GLFGKKEMRILMVGLDAAGKTTIL 198
G GKK + + G +GKTT L
Sbjct: 10 GASGKKPFTVFVEGNIGSGKTTFL 33
>AY579078-1|AAT81602.1| 425|Anopheles gambiae neuropeptide F
receptor protein.
Length = 425
Score = 21.8 bits (44), Expect = 9.8
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 404 CLADTFPIV--TVYYED*TLCILEIMP 330
C+ D +PI VYY TLC+ ++P
Sbjct: 200 CIED-WPIAYGRVYYSAFTLCVQYVLP 225
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,039
Number of Sequences: 2352
Number of extensions: 9367
Number of successful extensions: 33
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -