Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0409.Seq
(395 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 101 7e-21
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 92 4e-18
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 92 4e-18
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 91 7e-18
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 90 2e-17
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 88 7e-17
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 87 1e-16
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 87 1e-16
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 84 8e-16
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 84 8e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 74 1e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 66 2e-10
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 64 7e-10
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 64 9e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 61 9e-09
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 58 5e-08
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 54 1e-06
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 54 1e-06
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 53 2e-06
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 51 7e-06
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 50 1e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 50 2e-05
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 49 3e-05
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 49 4e-05
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 48 9e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 46 4e-04
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 45 5e-04
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 44 0.001
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 43 0.002
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 42 0.003
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 38 0.093
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 37 0.12
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 37 0.12
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 37 0.12
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 0.50
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 1.1
UniRef50_Q983B9 Cluster: Msl8734 protein; n=1; Mesorhizobium lot... 32 4.6
UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 32 4.6
UniRef50_Q0UKD5 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 4.6
UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2; ... 32 4.6
UniRef50_UPI0000ECCD29 Cluster: UPI0000ECCD29 related cluster; n... 31 6.1
UniRef50_Q2G3B0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q15VP0 Cluster: Putative uncharacterized protein precur... 31 8.1
UniRef50_Q09AQ5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_A1S950 Cluster: Sterol desaturase; n=2; Alteromonadales... 31 8.1
UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 101 bits (241), Expect = 7e-21
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VRLIPAPRGT
Sbjct: 156 ILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGT 202
Score = 91.9 bits (218), Expect = 4e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++
Sbjct: 199 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 258
Query: 86 IPLTKSPYSEF 54
TKSPY EF
Sbjct: 259 TVFTKSPYQEF 269
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 91.9 bits (218), Expect = 4e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++
Sbjct: 141 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 200
Query: 86 IPLTKSPYSEF 54
TKSPY EF
Sbjct: 201 TVFTKSPYQEF 211
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2
Query: 313 KVTGKCGSVTVRLIPAPRGT 254
KVTG+CGSV VRLIPAPRGT
Sbjct: 125 KVTGRCGSVLVRLIPAPRGT 144
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 91.9 bits (218), Expect = 4e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW++
Sbjct: 3 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 62
Query: 86 IPLTKSPYSEF 54
TKSPY EF
Sbjct: 63 TVFTKSPYQEF 73
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 91.1 bits (216), Expect = 7e-18
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLS++P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGT
Sbjct: 100 ILAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGT 146
Score = 87.0 bits (206), Expect = 1e-16
Identities = 47/87 (54%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = -1
Query: 311 GH-RQVWFCNSPADSCPSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 135
GH V C PA P G+VSAPVPKKLL MAG+ DCYTSAR T +LGNF
Sbjct: 130 GHCGSVLVCLIPA---PRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGNFAKATFD 186
Query: 134 XXXXXXXYLTPDLWRDIPLTKSPYSEF 54
YLTPDLW++ TKSPY EF
Sbjct: 187 TISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 89.8 bits (213), Expect = 2e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLS+LPV RGYWGN+I KPHTVP KVTG+CGSV VRLIPAPRGT
Sbjct: 96 ILAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGT 142
Score = 57.6 bits (133), Expect = 8e-08
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 159
P G VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 139 PRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 87.8 bits (208), Expect = 7e-17
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFR 215
I+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVRL+PAPRG L + F +
Sbjct: 129 IMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ 188
Score = 73.3 bits (172), Expect = 2e-12
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P G+V+APV K+ LQ+AG++DCYT +RGST TLGNF LTP+LW +
Sbjct: 172 PRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTPNLWAE 231
Query: 86 IPLTKSPYSEF 54
P ++P E+
Sbjct: 232 RPFGQTPIEEY 242
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 87.0 bits (206), Expect = 1e-16
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 263
ILAKLS++PV RGYWGNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 96 ILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 87.0 bits (206), Expect = 1e-16
Identities = 36/46 (78%), Positives = 43/46 (93%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRG 257
ILAKL+++PVRRGYWG+K+G+PHT+P KV GKCGSV VRLIPAPRG
Sbjct: 146 ILAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRG 191
Score = 58.0 bits (134), Expect = 6e-08
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIV++ KK+L MAG+ D YT +RG T TLGN +LTPDLW +
Sbjct: 189 PRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNSVKATYEALKNSYGFLTPDLWAE 248
Query: 86 IPLTKSPYSEF 54
K P EF
Sbjct: 249 TRFAKPPAQEF 259
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 84.2 bits (199), Expect = 8e-16
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = -1
Query: 272 SCPSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLW 93
S P GIVSAPVPKKLL MA + DCYT ARG T TLGNF YLTPDLW
Sbjct: 139 SAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFDAISKIYSYLTPDLW 197
Query: 92 RDIPLTKSPYSEF 54
++ TKSPY EF
Sbjct: 198 KETVFTKSPYQEF 210
Score = 37.5 bits (83), Expect = 0.093
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 313 KVTGKCGSVTVRLIPAPRGT 254
KVTG+CGSV VRL APRGT
Sbjct: 125 KVTGRCGSVLVRLFSAPRGT 144
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 84.2 bits (199), Expect = 8e-16
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
I+AKLSV+P+RRGYWG +G+PH++ K TGKCGSVTVRLIPAPRG+
Sbjct: 130 IIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGS 176
Score = 59.3 bits (137), Expect = 3e-08
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIV++P KKLLQ+AGV+D YT + G T TL N +LTP+LW +
Sbjct: 173 PRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAE 232
Query: 86 IPLTKSP 66
PL SP
Sbjct: 233 QPLPVSP 239
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 73.7 bits (173), Expect = 1e-12
Identities = 36/71 (50%), Positives = 42/71 (59%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P I+SAPVPKKLL +A + DCYTSARG T TL NF YLTP+LW+
Sbjct: 180 PPTRNIISAPVPKKLLLLANIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPNLWKG 239
Query: 86 IPLTKSPYSEF 54
+ KS Y EF
Sbjct: 240 LVFAKSTYLEF 250
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 325 TVPCKVTGKCGSVTVRLIPAPR 260
TV CKVTG+C SV + LIP R
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTR 183
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLS++PV G ++ +PH VPC+VTG+CGS+ V LIPAPRGT
Sbjct: 133 ILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGT 178
Score = 51.6 bits (118), Expect = 5e-06
Identities = 33/73 (45%), Positives = 38/73 (52%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P G VSAPVPK LL MAG+ D +SA G T TLGNF YL PDL ++
Sbjct: 175 PRGTGTVSAPVPK-LLMMAGIDDS-SSASGCTATLGNFTKAIFDTISKTHSYLIPDLQKE 232
Query: 86 IPLTKSPYSEFKV 48
KS Y +V
Sbjct: 233 TVFAKSLYQNSRV 245
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 64.5 bits (150), Expect = 7e-10
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -2
Query: 388 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
AK ++ PVR G W GKPHTV CK +GKCG+ V++IPAPRGT
Sbjct: 119 AKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGT 163
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GI+S V KK+ ++AG++D YT + G+T T NF + PD W +
Sbjct: 160 PRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAALEATSSMILPDQWEE 219
Query: 86 IPLTKSPYSEF 54
P T +P EF
Sbjct: 220 KPRTLNPLLEF 230
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 64.1 bits (149), Expect = 9e-10
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
IL KL ++PV RGY G+K KPHTV CKVTG GSV++ LIPAPR T
Sbjct: 135 ILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDT 180
Score = 45.2 bits (102), Expect = 5e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -1
Query: 251 IVSAPVPKKLLQMAGVQDCYTSARG 177
I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 182 ISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 60.9 bits (141), Expect = 9e-09
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFR 215
AK++++PVRRG W G+PH++P KV GK GSV V L+PAP+GT L + L++
Sbjct: 110 AKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLT 169
Query: 214 W 212
+
Sbjct: 170 Y 170
Score = 33.1 bits (72), Expect = 2.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
P G+V V K LL AG++D +++ +G T T NF
Sbjct: 153 PKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 58.4 bits (135), Expect = 5e-08
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = -2
Query: 388 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQF 233
AKL++ +RRGYW + GKP+T+ K +GK GSV V + PAP+GT + +F
Sbjct: 164 AKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKF 215
Score = 35.5 bits (78), Expect = 0.38
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -1
Query: 290 CNSPADSCPSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXY 111
C PA P GIV++ +L+++G++DC+T + G T + N +
Sbjct: 200 CIKPA---PKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKF 256
Query: 110 LTPDLW 93
+TPD W
Sbjct: 257 VTPDYW 262
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 54.0 bits (124), Expect = 1e-06
Identities = 25/32 (78%), Positives = 25/32 (78%)
Frame = -2
Query: 349 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
GNKIGK H V CKVTG CGSV V LIPA RGT
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGT 38
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1
Query: 254 GIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
GI SAPVP K L MAG+ DCYTSARG T +L F
Sbjct: 39 GISSAPVPTKPLMMAGIDDCYTSARGCTASLDYF 72
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 54.0 bits (124), Expect = 1e-06
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = -1
Query: 251 IVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 72
IVS VP+KL+ A + CYTSAR T TLGN TP+LW++ TK
Sbjct: 128 IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLWKEAVFTK 186
Query: 71 SPY 63
SPY
Sbjct: 187 SPY 189
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFR 215
AKL+++ ++RG W GKPHT+P V GK GSV+V L PAP+G L + ++ R
Sbjct: 102 AKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 51.2 bits (117), Expect = 7e-06
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCL 242
AKL+++ ++RG W + +PH+VP V GK GSV VRLIP PRG L +
Sbjct: 117 AKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVI 167
Score = 35.9 bits (79), Expect = 0.28
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
P G+V V KK+L++AGVQD ++ G T T NF
Sbjct: 160 PRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNF 197
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 50.4 bits (115), Expect = 1e-05
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTEL 248
AKLS++ VR G W G PH++P G CGSV V L+PAPRG L
Sbjct: 113 AKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGL 161
Score = 33.5 bits (73), Expect = 1.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
P G+V+ V K +L +AGV+D +T G T T NF
Sbjct: 156 PRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 49.6 bits (113), Expect = 2e-05
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFR 215
AKL+++ V RG W G PH++P +V GK GSV V L PAP+G + ++ FR
Sbjct: 117 AKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -2
Query: 391 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTEL 248
+AKL+++ V RG W G+PHTV + GK GSV V L PAPRG L
Sbjct: 103 IAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGL 152
Score = 33.5 bits (73), Expect = 1.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
P G+ +K+L++AG++D +T + G+T T NF
Sbjct: 147 PRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 48.8 bits (111), Expect = 4e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTEL 248
IL + S+ G+ GNKI KPHTV C+VT SV V I APRGT++
Sbjct: 56 ILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDI 104
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -1
Query: 272 SCPSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLW 93
S P I+SAPVPKKLL+MA + D + ARG T L N LT D W
Sbjct: 97 SAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFW 155
Query: 92 R 90
R
Sbjct: 156 R 156
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 47.6 bits (108), Expect = 9e-05
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTEL 248
A L+V P++ G W + + H+VP KV GK GSVT+ +IPAPRG L
Sbjct: 143 AYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGL 191
Score = 36.7 bits (81), Expect = 0.16
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 156
P G+V+ K+LL++AG++D +T+A+GST T+ +
Sbjct: 186 PRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTMNS 222
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -1
Query: 251 IVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
+V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 5 VVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 45.6 bits (103), Expect = 4e-04
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLR 227
AKL+++PV RG W + G +VP K+TG+ GS V L+PAP G L + + R
Sbjct: 89 AKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGR 144
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -2
Query: 358 GYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGT 254
GY GNKIG PHT+PC VT + V V L APRGT
Sbjct: 120 GYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGT 155
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -2
Query: 388 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTEL 248
A L+V P++ G W + + H+VP KV GK GSV + ++PAPRG L
Sbjct: 124 ALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGL 172
Score = 36.3 bits (80), Expect = 0.22
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 165
P G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 167 PRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 43.2 bits (97), Expect = 0.002
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 153
P GIVSAPV K L AG+ +CY SAR T TL NF
Sbjct: 78 PRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
Score = 34.7 bits (76), Expect = 0.66
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 343 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSF 221
++ + V KVT GSV V LIPAPRGT + L F
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKF 92
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 42.3 bits (95), Expect = 0.003
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = -2
Query: 391 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRS 224
+AKL+++ V RG W ++ G +++ K GK GSVTV + PAP+G L + +R+
Sbjct: 154 VAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRN 211
Score = 33.1 bits (72), Expect = 2.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 156
P G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 198 PQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 37.5 bits (83), Expect = 0.093
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 272 NQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKD 394
NQ + TTL L GV L+ + TPVTSS+W N QL D
Sbjct: 87 NQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDD 127
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 37.1 bits (82), Expect = 0.12
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 255 VPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGKTDN 383
VP GAG+ T TEP P+TL G +CG LLP P+ + DN
Sbjct: 46 VPMGAGMKSTRTEPQWPITLCG-LCGACCLLP--PVASTHRDN 85
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 154 KFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPYHEG 267
K PKV V+P A V QS P+ FLGT A+ +P G
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMG 49
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.1 bits (82), Expect = 0.12
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -1
Query: 248 VSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 72
V V KK L +A +QDCY AR + LGN+ YLT DLW + TK
Sbjct: 10 VFTTVLKKKLLLASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTENVCTK 68
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -1
Query: 365 SKRLLG*QDRKATHRPLQGHRQVWFC 288
++RLLG QDR+A HRPLQG R + C
Sbjct: 93 AQRLLGEQDRQAPHRPLQGDRPLRLC 118
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 0.50
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 110 LTPDLWRDIPLTKSPYSEF 54
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 33.9 bits (74), Expect = 1.1
Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = -1
Query: 251 IVSAPVPKKLLQM----AGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDI 84
I+S VPK LL + A D SA G T LG LTPDLW
Sbjct: 167 IISGLVPKNLLLLLLLLASTDDRCISASGCTDALGRLAKTTFDAISKTYSCLTPDLWNK- 225
Query: 83 PLTKSPYSE 57
TK YSE
Sbjct: 226 --TKPLYSE 232
>UniRef50_Q983B9 Cluster: Msl8734 protein; n=1; Mesorhizobium
loti|Rep: Msl8734 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 62
Score = 31.9 bits (69), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 329 THRPLQGHRQVWFCNSPADSCPSWYG 252
THRP+ G W SPA S P YG
Sbjct: 2 THRPVPGEHTAWTTASPASSVPLEYG 27
>UniRef50_A2XN57 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 84
Score = 31.9 bits (69), Expect = 4.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 110 LTPDLWRDIPLTKSPYSEF 54
LTPD WRD KSP+ E+
Sbjct: 44 LTPDFWRDTKFVKSPFQEY 62
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 31.9 bits (69), Expect = 4.6
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 371 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPS--WY 255
+S KR+LG QDR TH P+Q R+ S S WY
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWY 209
>UniRef50_Q0UKD5 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 506
Score = 31.9 bits (69), Expect = 4.6
Identities = 25/73 (34%), Positives = 33/73 (45%)
Frame = -2
Query: 274 IPAPRGTELCLRQFLRSFFRWLVYRTATPQLVVQLAPWEILLKPHMLPLPRHMPTSLLTC 95
+PA EL RQ + FR + TA + APW L+ H+LPL H T+L
Sbjct: 88 LPAKLLFELLHRQAELTCFRARLDWTAAAGAIDDTAPWTTDLE-HVLPLALHQVTTLRVY 146
Query: 94 GGTSR*LSLHTQS 56
G HTQ+
Sbjct: 147 IGDLNAPGAHTQA 159
>UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 299
Score = 31.9 bits (69), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 21 FSYYTMTVLDFEL*VWRLSQRDVPPQVRSEVGICLGNGSICG 146
F+ YT DF + W+LSQ+ +PP RS +G G+ G
Sbjct: 217 FNKYTQAAKDFIVEQWQLSQKSLPP--RSSIGSAQPTGTANG 256
>UniRef50_UPI0000ECCD29 Cluster: UPI0000ECCD29 related cluster; n=2;
Gallus gallus|Rep: UPI0000ECCD29 UniRef100 entry - Gallus
gallus
Length = 3883
Score = 31.5 bits (68), Expect = 6.1
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 279 G*FLPLVVRNCVCAS-S*EASSDGWCTGLLHLSSWFNWHLGKFC*SHICCHCQDICLPH 106
G + L + CVC + + SS+G C GLL LS W W C H D+ PH
Sbjct: 3247 GDIILLGCKECVCQDGALQCSSEG-CQGLLPLSPWSEWTPCSTCLPLFPSHLGDV-TPH 3303
>UniRef50_Q2G3B0 Cluster: Putative uncharacterized protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep: Putative
uncharacterized protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 435
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 132 GSICGFSKISQGAS*TTS*GVAVLYTSHLKKLLR--NWR 242
GS+CGF +S GA G+ +L T ++K ++ NWR
Sbjct: 233 GSVCGFFSLSSGAFLALLIGLGILVTDWVQKKVQFLNWR 271
>UniRef50_Q15VP0 Cluster: Putative uncharacterized protein
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Putative uncharacterized protein precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 343
Score = 31.1 bits (67), Expect = 8.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 218 EEAS*ELAQTQFRTTRGRNQPDCYRTTLAGDLARDGV 328
++A E TQ T G Q CYR TLAG+ A D +
Sbjct: 68 DDAVIESITTQSCTLSGGTQTTCYRITLAGEPANDEI 104
>UniRef50_Q09AQ5 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 499
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -1
Query: 338 RKATHRPLQGHRQVWFCNSPADSCPSWYGIVSAPVPKKLLQMAGVQDC 195
+ A P QG V C+SP CP+W G P + + G C
Sbjct: 446 QSARLHPWQGGATVMNCSSPRGVCPNWEGGPHRPPSRVAPRRGGTAPC 493
>UniRef50_A1S950 Cluster: Sterol desaturase; n=2;
Alteromonadales|Rep: Sterol desaturase - Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B)
Length = 386
Score = 31.1 bits (67), Expect = 8.1
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 66 WRLSQRDVPPQVRSEVGICLGNGSICGFSKISQGAS*TTS*GVAVLYTSHL 218
++ QRDVPP R LG G I GF+ + GA + +A LY S+L
Sbjct: 5 YQYQQRDVPP--RPHKAFRLGEGKISGFASVCLGALSLLA-VLAYLYPSYL 52
>UniRef50_Q38AQ9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 470
Score = 31.1 bits (67), Expect = 8.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 222 SSDGWCTGLLHLSSWFNW 169
S DGWC G+ H ++ FNW
Sbjct: 419 SRDGWCAGVRHSNTPFNW 436
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,541,816
Number of Sequences: 1657284
Number of extensions: 8706054
Number of successful extensions: 22289
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 21652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22278
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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