Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0409.Seq
(395 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 103 9e-23
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 103 9e-23
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 103 9e-23
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 103 9e-23
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 103 9e-23
U46688-1|AAB02195.1| 754|Drosophila melanogaster D-stat protein... 27 9.0
U40070-1|AAC46984.1| 761|Drosophila melanogaster stat protein. 27 9.0
BT021314-1|AAX33462.1| 761|Drosophila melanogaster RE13194p pro... 27 9.0
AY118799-1|AAM50659.1| 171|Drosophila melanogaster GH19411p pro... 27 9.0
AY094839-1|AAM11192.1| 466|Drosophila melanogaster LP05693p pro... 27 9.0
AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p pro... 27 9.0
AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-P... 27 9.0
AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-P... 27 9.0
AE014297-2803|AAX52969.1| 635|Drosophila melanogaster CG4257-PG... 27 9.0
AE014297-2802|AAN14351.2| 628|Drosophila melanogaster CG4257-PB... 27 9.0
AE014297-2801|AAS65180.1| 761|Drosophila melanogaster CG4257-PF... 27 9.0
AE014297-2800|AAF55773.2| 754|Drosophila melanogaster CG4257-PE... 27 9.0
AE014297-2799|AAN14350.2| 754|Drosophila melanogaster CG4257-PC... 27 9.0
AE014134-1517|AAF52679.3| 1012|Drosophila melanogaster CG13401-P... 27 9.0
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 103 bits (247), Expect = 9e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/71 (59%), Positives = 50/71 (70%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVP+KLL MAG++DCYTSARGSTGTLGNF YLTPDLW++
Sbjct: 182 PRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKE 241
Query: 86 IPLTKSPYSEF 54
+PL +PY +
Sbjct: 242 MPLGSTPYQAY 252
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 103 bits (247), Expect = 9e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW++
Sbjct: 182 PRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKE 241
Query: 86 IPLTKSPYSEF 54
+PL +PY +
Sbjct: 242 MPLGSTPYQAY 252
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 103 bits (247), Expect = 9e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW++
Sbjct: 182 PRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKE 241
Query: 86 IPLTKSPYSEF 54
+PL +PY +
Sbjct: 242 MPLGSTPYQAY 252
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 103 bits (247), Expect = 9e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW++
Sbjct: 182 PRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKE 241
Query: 86 IPLTKSPYSEF 54
+PL +PY +
Sbjct: 242 MPLGSTPYQAY 252
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 103 bits (247), Expect = 9e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -2
Query: 394 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 254
ILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGT
Sbjct: 139 ILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -1
Query: 266 PSWYGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRD 87
P GIVSAPVPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW++
Sbjct: 182 PRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKE 241
Query: 86 IPLTKSPYSEF 54
+PL +PY +
Sbjct: 242 MPLGSTPYQAY 252
>U46688-1|AAB02195.1| 754|Drosophila melanogaster D-stat protein
short form protein.
Length = 754
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>U40070-1|AAC46984.1| 761|Drosophila melanogaster stat protein.
Length = 761
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>BT021314-1|AAX33462.1| 761|Drosophila melanogaster RE13194p
protein.
Length = 761
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>AY118799-1|AAM50659.1| 171|Drosophila melanogaster GH19411p
protein.
Length = 171
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 328 HTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFRWLVY 203
H +PCKV+ + + L A G L Q L F+ WL +
Sbjct: 20 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 61
>AY094839-1|AAM11192.1| 466|Drosophila melanogaster LP05693p
protein.
Length = 466
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 163 LFFYTTTTVNDFQIRVWTLS 182
>AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p
protein.
Length = 911
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 328 HTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFRWLVY 203
H +PCKV+ + + L A G L Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-PB,
isoform B protein.
Length = 911
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 328 HTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFRWLVY 203
H +PCKV+ + + L A G L Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-PA,
isoform A protein.
Length = 911
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 328 HTVPCKVTGKCGSVTVRLIPAPRGTELCLRQFLRSFFRWLVY 203
H +PCKV+ + + L A G L Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>AE014297-2803|AAX52969.1| 635|Drosophila melanogaster CG4257-PG,
isoform G protein.
Length = 635
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 332 LFFYTTTTVNDFQIRVWTLS 351
>AE014297-2802|AAN14351.2| 628|Drosophila melanogaster CG4257-PB,
isoform B protein.
Length = 628
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 332 LFFYTTTTVNDFQIRVWTLS 351
>AE014297-2801|AAS65180.1| 761|Drosophila melanogaster CG4257-PF,
isoform F protein.
Length = 761
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>AE014297-2800|AAF55773.2| 754|Drosophila melanogaster CG4257-PE,
isoform E protein.
Length = 754
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>AE014297-2799|AAN14350.2| 754|Drosophila melanogaster CG4257-PC,
isoform C protein.
Length = 754
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 18 LFSYYTMTVLDFEL*VWRLS 77
LF Y T TV DF++ VW LS
Sbjct: 458 LFFYTTTTVNDFQIRVWTLS 477
>AE014134-1517|AAF52679.3| 1012|Drosophila melanogaster CG13401-PA,
isoform A protein.
Length = 1012
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 222 KLLRNWRRHNSVPRGAGISRTVTEPHLPVT 311
++L N+ R N VP AGI+ VTE H P +
Sbjct: 55 QVLMNFLRKNGVPDEAGIALRVTE-HTPAS 83
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,576,567
Number of Sequences: 53049
Number of extensions: 429493
Number of successful extensions: 1133
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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