Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0407.Seq
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089391-1|AAL90129.1|  538|Drosophila melanogaster AT21495p pro...    28   5.5  
AE014134-428|AAF51242.3|  538|Drosophila melanogaster CG18559-PA...    28   5.5  
AY840220-1|AAV90635.1|  649|Drosophila melanogaster Tef protein.       27   9.7  
AY840216-1|AAV90631.1|  631|Drosophila melanogaster truncated Te...    27   9.7  
AY051818-1|AAK93242.1|  649|Drosophila melanogaster LD32631p pro...    27   9.7  
AE013599-2410|AAF57911.1|  649|Drosophila melanogaster CG8961-PA...    27   9.7  

>AY089391-1|AAL90129.1|  538|Drosophila melanogaster AT21495p
           protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 112 TPTNNYKISQTVCLLCIHLLIEKFYVYHTW 201
           T   N  I  ++ L+ +HLL+   Y+Y TW
Sbjct: 27  TKRGNMYILASLALILLHLLVLPIYLYLTW 56


>AE014134-428|AAF51242.3|  538|Drosophila melanogaster CG18559-PA
           protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 112 TPTNNYKISQTVCLLCIHLLIEKFYVYHTW 201
           T   N  I  ++ L+ +HLL+   Y+Y TW
Sbjct: 27  TKRGNMYILASLALILLHLLVLPIYLYLTW 56


>AY840220-1|AAV90635.1|  649|Drosophila melanogaster Tef protein.
          Length = 649

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 31  QLYNFLPITFLYS*K---HIFLLIKQYFIPTPTNNYKISQTVCL 153
           +L++FLP++F Y  K    IF+L K+Y     ++  +   T C+
Sbjct: 588 KLFSFLPVSFAYFCKCCDDIFILKKEYLKHLISHQVRFQCTKCI 631


>AY840216-1|AAV90631.1|  631|Drosophila melanogaster truncated Tef
           protein.
          Length = 631

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 31  QLYNFLPITFLYS*K---HIFLLIKQYFIPTPTNNYKISQTVCL 153
           +L++FLP++F Y  K    IF+L K+Y     ++  +   T C+
Sbjct: 588 KLFSFLPVSFAYFCKCCDDIFILKKEYLKHLISHQVRFQCTKCI 631


>AY051818-1|AAK93242.1|  649|Drosophila melanogaster LD32631p
           protein.
          Length = 649

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 31  QLYNFLPITFLYS*K---HIFLLIKQYFIPTPTNNYKISQTVCL 153
           +L++FLP++F Y  K    IF+L K+Y     ++  +   T C+
Sbjct: 588 KLFSFLPVSFAYFCKCCDDIFILKKEYLKHLISHQVRFQCTKCI 631


>AE013599-2410|AAF57911.1|  649|Drosophila melanogaster CG8961-PA
           protein.
          Length = 649

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 31  QLYNFLPITFLYS*K---HIFLLIKQYFIPTPTNNYKISQTVCL 153
           +L++FLP++F Y  K    IF+L K+Y     ++  +   T C+
Sbjct: 588 KLFSFLPVSFAYFCKCCDDIFILKKEYLKHLISHQVRFQCTKCI 631


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,307,406
Number of Sequences: 53049
Number of extensions: 348835
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)