Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0405.Seq
         (408 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015965-1|AAV36850.1|  525|Drosophila melanogaster RH39295p pro...    27   9.5  
AY060623-1|AAL28171.1|  407|Drosophila melanogaster GH04611p pro...    27   9.5  
AF342988-1|AAL73340.1|  525|Drosophila melanogaster KAL-1 protein.     27   9.5  
AE014297-3467|AAF56243.2|  525|Drosophila melanogaster CG6173-PA...    27   9.5  

>BT015965-1|AAV36850.1|  525|Drosophila melanogaster RH39295p
           protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 404 FSGSLSGIEP*FPVTRDNHGSRRNYHRKLIRQTFERCVAGT*PCDLQKLSDSSKLTTSDA 225
           F+ +L  +EP  P+    +G+RR +H      + ER      P  L ++S +    TS A
Sbjct: 359 FNTTLQPLEPITPLQCSGNGNRRRHHHTSSSMSSERATTSE-PVALNEVSPTITNRTSAA 417


>AY060623-1|AAL28171.1|  407|Drosophila melanogaster GH04611p
           protein.
          Length = 407

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 404 FSGSLSGIEP*FPVTRDNHGSRRNYHRKLIRQTFERCVAGT*PCDLQKLSDSSKLTTSDA 225
           F+ +L  +EP  P+    +G+RR +H      + ER      P  L ++S +    TS A
Sbjct: 241 FNTTLQPLEPITPLQCSGNGNRRRHHHTSSSMSSERATTSE-PVALNEVSPTITNRTSAA 299


>AF342988-1|AAL73340.1|  525|Drosophila melanogaster KAL-1 protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 404 FSGSLSGIEP*FPVTRDNHGSRRNYHRKLIRQTFERCVAGT*PCDLQKLSDSSKLTTSDA 225
           F+ +L  +EP  P+    +G+RR +H      + ER      P  L ++S +    TS A
Sbjct: 359 FNTTLQPLEPITPLQCSGNGNRRRHHHTSSSMSSERATTSE-PVALNEVSPTITNRTSAA 417


>AE014297-3467|AAF56243.2|  525|Drosophila melanogaster CG6173-PA
           protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 404 FSGSLSGIEP*FPVTRDNHGSRRNYHRKLIRQTFERCVAGT*PCDLQKLSDSSKLTTSDA 225
           F+ +L  +EP  P+    +G+RR +H      + ER      P  L ++S +    TS A
Sbjct: 359 FNTTLQPLEPITPLQCSGNGNRRRHHHTSSSMSSERATTSE-PVALNEVSPTITNRTSAA 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,859,601
Number of Sequences: 53049
Number of extensions: 337828
Number of successful extensions: 833
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)