Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0401.Seq
(408 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M86667-1|AAC37544.1| 391|Homo sapiens NAP protein. 54 1e-07
BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly pro... 54 1e-07
BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly pro... 54 1e-07
CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein. 46 4e-05
BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly pro... 46 4e-05
AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly pro... 46 4e-05
AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly Pro... 46 4e-05
U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly prote... 45 9e-05
BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly pro... 45 9e-05
D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly prote... 42 6e-04
BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly pro... 42 6e-04
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 42 6e-04
AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly pro... 42 6e-04
BC104883-1|AAI04884.1| 182|Homo sapiens nucleosome assembly pro... 32 0.85
AK054689-1|BAB70793.1| 182|Homo sapiens protein ( Homo sapiens ... 32 0.85
>M86667-1|AAC37544.1| 391|Homo sapiens NAP protein.
Length = 391
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 225
SLP V+RR+ AL+ LQ + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 226 DDEC 237
++EC
Sbjct: 129 EEEC 132
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 261 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNV 404
EE+E++ ++ A E +EKKD++ +P KGIP+FW +F+NV
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDP------KGIPEFWLTVFKNV 178
>BT007023-1|AAP35669.1| 391|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 391
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 225
SLP V+RR+ AL+ LQ + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 226 DDEC 237
++EC
Sbjct: 129 EEEC 132
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 261 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNV 404
EE+E++ ++ A E +EKKD++ +P KGIP+FW +F+NV
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDP------KGIPEFWLTVFKNV 178
>BC002387-1|AAH02387.1| 391|Homo sapiens nucleosome assembly
protein 1-like 1 protein.
Length = 391
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/64 (42%), Positives = 34/64 (53%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 225
SLP V+RR+ AL+ LQ + IEAKFY EVH R I+N YEP
Sbjct: 69 SLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPT 128
Query: 226 DDEC 237
++EC
Sbjct: 129 EEEC 132
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 261 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNV 404
EE+E++ ++ A E +EKKD++ +P KGIP+FW +F+NV
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDP------KGIPEFWLTVFKNV 178
>CR457095-1|CAG33376.1| 460|Homo sapiens NAP1L2 protein.
Length = 460
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 25 LHAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 204
L + + SLP V+ R+ AL+ LQ ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 205 NGTYEPNDDEC 237
N YEP ++EC
Sbjct: 156 NAIYEPTEEEC 166
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 297 AITEGEEKKDDKAIEPPMDPNV-----KGIPDFWYNIFRNV 404
A+ E EE++++ IE + N KGIPDFW + +NV
Sbjct: 211 AVEEEEEEEEEDDIEATGEENKEEEDPKGIPDFWLTVLKNV 251
>BC026325-1|AAH26325.1| 460|Homo sapiens nucleosome assembly
protein 1-like 2 protein.
Length = 460
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 25 LHAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 204
L + + SLP V+ R+ AL+ LQ ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 205 NGTYEPNDDEC 237
N YEP ++EC
Sbjct: 156 NAIYEPTEEEC 166
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 297 AITEGEEKKDDKAIEPPMDPNV-----KGIPDFWYNIFRNV 404
A+ E EE++++ IE + N KGIPDFW + +NV
Sbjct: 211 AVEEEEEEEEEDDIEATGEENKEEEDPKGIPDFWLTVLKNV 251
>AF136178-1|AAP97268.1| 460|Homo sapiens nucleosome assembly
protein Bpx protein.
Length = 460
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 25 LHAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 204
L + + SLP V+ R+ AL+ LQ ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 205 NGTYEPNDDEC 237
N YEP ++EC
Sbjct: 156 NAIYEPTEEEC 166
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 297 AITEGEEKKDDKAIEPPMDPNV-----KGIPDFWYNIFRNV 404
A+ E EE++++ IE + N KGIPDFW + +NV
Sbjct: 211 AVEEEEEEEEEDDIEATGEENKEEEDPKGIPDFWLTVLKNV 251
>AB027013-1|BAA84706.1| 460|Homo sapiens Nucleosome Assembly
Protein 1-like 2 protein.
Length = 460
Score = 46.4 bits (105), Expect = 4e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 25 LHAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIV 204
L + + SLP V+ R+ AL+ LQ ++E+KF E H R I+
Sbjct: 96 LDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQII 155
Query: 205 NGTYEPNDDEC 237
N YEP ++EC
Sbjct: 156 NAIYEPTEEEC 166
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 297 AITEGEEKKDDKAIEPPMDPNV-----KGIPDFWYNIFRNV 404
A+ E EE++++ IE + N KGIPDFW + +NV
Sbjct: 211 AVEEEEEEEEEDDIEATGEENKEEEDPKGIPDFWLTVLKNV 251
>U77456-1|AAC50870.1| 375|Homo sapiens nucleosome assembly protein
2 protein.
Length = 375
Score = 45.2 bits (102), Expect = 9e-05
Identities = 25/63 (39%), Positives = 29/63 (46%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 225
+LP V+RRI AL+ LQ IEAKFY EVH R + G EP
Sbjct: 58 TLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPT 117
Query: 226 DDE 234
D E
Sbjct: 118 DAE 120
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 261 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNV 404
EEE+LA +++ + +KA +P+ KGIP+FW+ IFRNV
Sbjct: 129 EEEKLAGDMKSKVVVT------EKAAATAEEPDPKGIPEFWFTIFRNV 170
>BC022090-1|AAH22090.1| 375|Homo sapiens nucleosome assembly
protein 1-like 4 protein.
Length = 375
Score = 45.2 bits (102), Expect = 9e-05
Identities = 25/63 (39%), Positives = 29/63 (46%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPN 225
+LP V+RRI AL+ LQ IEAKFY EVH R + G EP
Sbjct: 58 TLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPT 117
Query: 226 DDE 234
D E
Sbjct: 118 DAE 120
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 261 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNV 404
EEE+LA +++ + +KA +P+ KGIP+FW+ IFRNV
Sbjct: 129 EEEKLAGDMKSKVVVT------EKAAATAEEPDPKGIPEFWFTIFRNV 170
>D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly protein
protein.
Length = 506
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 49 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 228
LP VR R++ALR +Q E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 229 DEC 237
+EC
Sbjct: 160 EEC 162
>BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 49 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 228
LP VR R++ALR +Q E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 229 DEC 237
+EC
Sbjct: 160 EEC 162
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 49 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 228
LP VR R++ALR +Q E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 229 DEC 237
+EC
Sbjct: 160 EEC 162
>AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 variant protein.
Length = 506
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 49 LPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPND 228
LP VR R++ALR +Q E ++ F +H R I+N YEP +
Sbjct: 100 LPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTE 159
Query: 229 DEC 237
+EC
Sbjct: 160 EEC 162
>BC104883-1|AAI04884.1| 182|Homo sapiens nucleosome assembly
protein 1-like 5 protein.
Length = 182
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHA 144
SLP +V+ R+ AL+ LQK IEAKF E A
Sbjct: 72 SLPNSVKCRVLALKKLQKRCDKIEAKFDKEFQA 104
>AK054689-1|BAB70793.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ30127 fis, clone BRACE1000115, weakly similar to
NUCLEOSOME ASSEMBLY PROTEIN 1-LIKE 2. ).
Length = 182
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 46 SLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHA 144
SLP +V+ R+ AL+ LQK IEAKF E A
Sbjct: 72 SLPNSVKCRVLALKKLQKRCDKIEAKFDKEFQA 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,794,142
Number of Sequences: 237096
Number of extensions: 1239059
Number of successful extensions: 7150
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7139
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -