Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0400.Seq
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 111 2e-25
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 2e-25
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 111 2e-25
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 111 2e-25
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 111 2e-25
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 111 2e-25
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 111 2e-25
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 104 2e-23
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 102 1e-22
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 2e-22
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 100 4e-22
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 4e-17
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 50 1e-06
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 50 1e-06
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 50 1e-06
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 47 5e-06
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 47 5e-06
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 45 2e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 4e-04
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 36 0.017
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_48625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_34880| Best HMM Match : Methuselah_N (HMM E-Value=9.6) 28 3.3
SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 27 5.8
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 324 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 375
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 374 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 423
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 277 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 328
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 327 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 376
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 711 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 762
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 1120 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 1171
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 1170 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1219
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEE
Sbjct: 761 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 340 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 325 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 376
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 756 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 807
Score = 98.7 bits (235), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEV ++S
Sbjct: 806 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAVES 855
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEE
Sbjct: 375 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 305 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 356
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 355 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 404
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 773 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 824
Score = 111 bits (267), Expect = 2e-25
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTA+AEAWA L
Sbjct: 340 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARL 391
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 823 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 872
Score = 94.3 bits (224), Expect = 3e-20
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEE
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 925 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 976
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 975 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1024
Score = 73.3 bits (172), Expect = 7e-14
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKV 308
TIQFVDWCPTGFKVGINYQPPTVVP GDLAK+
Sbjct: 404 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKI 435
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 265 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 316
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 315 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 138 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 189
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 188 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 237
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 111 bits (268), Expect = 2e-25
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKVQRAVCMLSNTTAIAEAWA L
Sbjct: 340 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 104 bits (250), Expect = 2e-23
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQ PT VP GDLAKVQR+VCMLSNTTAIA+AWA L
Sbjct: 138 TIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARL 189
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
RL+HKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEE
Sbjct: 188 RLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 102 bits (245), Expect = 1e-22
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 303 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 352
Score = 64.5 bits (150), Expect = 3e-11
Identities = 34/52 (65%), Positives = 34/52 (65%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
T QF DWCPTGFKVGIN QPPTVVP GDLAK IAEAWA L
Sbjct: 265 TFQFGDWCPTGFKVGINSQPPTVVPGGDLAK------------PIAEAWARL 304
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 101 bits (243), Expect = 2e-22
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG DS
Sbjct: 542 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 591
Score = 91.5 bits (217), Expect = 2e-19
Identities = 50/73 (68%), Positives = 50/73 (68%), Gaps = 21/73 (28%)
Frame = -1
Query: 403 TIQFVDWCPTGFK---------------------VGINYQPPTVVPXGDLAKVQRAVCML 287
TIQFVDWCPTGFK VGINYQPPTVVP GDLAKVQRAVCML
Sbjct: 471 TIQFVDWCPTGFKCHPNISDKQKKSTKTFYSGTQVGINYQPPTVVPGGDLAKVQRAVCML 530
Query: 286 SNTTAIAEAWAAL 248
SNTTAIAEAWA L
Sbjct: 531 SNTTAIAEAWARL 543
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 100 bits (240), Expect = 4e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RL+HKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 88 RLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 137
Score = 72.9 bits (171), Expect = 9e-14
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -1
Query: 364 VGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
VGINYQ PT VP GDLAKVQR+VCMLSNTTAIA+AWA L
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARL 89
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 84.2 bits (199), Expect = 4e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = -3
Query: 239 FDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
+D YAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 325 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 369
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 47.2 bits (107), Expect = 5e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA ++ L +Y++
Sbjct: 145 RVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 47.2 bits (107), Expect = 5e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA ++ L +Y++
Sbjct: 207 RVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPP 341
TIQFVDWCPTGFKVGI ++ P
Sbjct: 339 TIQFVDWCPTGFKVGIRHKAP 359
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 40.7 bits (91), Expect = 4e-04
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ + LM+ +RAF+HW EGM +F EA D+ L Y++
Sbjct: 285 RIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.5 bits (78), Expect = 0.017
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEARED 150
R +F M+ +RAF+HW EGM EF+E + +
Sbjct: 199 RFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 29.9 bits (64), Expect = 0.82
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 341 GWLVVDTDLETGWTPVDELD 400
GW VD D+E GW P L+
Sbjct: 38 GWCFVDVDVELGWVPASYLE 57
>SB_48625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 313 KVQRAVCMLSNTTAIAEAWAALTTSSTSCTPSVLSC 206
++QR + +L N T + EA LT + CTP VLSC
Sbjct: 62 ELQRRLPLLRNAT-VGEA-EGLTEFARECTPRVLSC 95
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 308 NLGQVAXGHHGGWLVVDTDLETGWTPVDELD 400
N+ V + GW VD D E GW P L+
Sbjct: 158 NVVDVIQKNEHGWWFVDLDGELGWVPASYLE 188
>SB_34880| Best HMM Match : Methuselah_N (HMM E-Value=9.6)
Length = 343
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 190 SPTXQCTKARLAYMRSNLWSRRPKLXXXXXXXXXXXXHVEPWPSRLRAPRWVAG 351
S Q T A + R+NLW+R PKL H + W R ++ G
Sbjct: 246 STPEQYTAAVQSLKRNNLWTRNPKL-QPSWSQKTWLSHYKKWAWAFRCESFIVG 298
>SB_22560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 367 KVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAALTTSSTSCTPSVLSCTG 200
+ G+N G + VQR+V +L + A EA A S+ CT +L G
Sbjct: 4 RFGVNSLTNATDITGAILHVQRSVSVLESEYARVEAMMAQHLSADQCTVKLLPLEG 59
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 91 VREPKSTKPMKYLLWRTRTVLHSG 20
V E KP+KY ++ +TV++SG
Sbjct: 570 VAEDDGAKPLKYTFYQDKTVVYSG 593
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +2
Query: 332 HHGGWL-VVDTDLETGWTPV 388
HH GW ++DT+++ GW PV
Sbjct: 750 HHAGWAQLMDTEMQ-GWKPV 768
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,410,773
Number of Sequences: 59808
Number of extensions: 190842
Number of successful extensions: 594
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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