Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0400.Seq
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 108 2e-24
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 108 2e-24
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 108 2e-24
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 108 2e-24
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 107 2e-24
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 107 2e-24
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 107 2e-24
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 107 2e-24
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 106 7e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 106 7e-24
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 105 9e-24
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 105 1e-23
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 103 5e-23
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 101 2e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 101 2e-22
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 98 2e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 95 1e-20
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 50 8e-07
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 50 8e-07
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 50 8e-07
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 49 1e-06
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.31
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 31 0.31
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 29 1.3
U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine rec... 28 2.2
AF016448-3|AAB65958.1| 217|Caenorhabditis elegans Hypothetical ... 27 5.1
Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 27 6.8
Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical p... 27 6.8
AC006809-2|AAF59625.1| 160|Caenorhabditis elegans Hypothetical ... 26 9.0
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 108 bits (259), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 108 bits (259), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 108 bits (259), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 108 bits (259), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
TIQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 107 bits (258), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
+IQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWA L
Sbjct: 340 SIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARL 391
Score = 102 bits (245), Expect = 9e-23
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 107 bits (258), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
+IQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWA L
Sbjct: 339 SIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARL 390
Score = 102 bits (245), Expect = 9e-23
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 389 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 107 bits (258), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
+IQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWA L
Sbjct: 340 SIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARL 391
Score = 102 bits (245), Expect = 9e-23
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 107 bits (258), Expect = 2e-24
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
+IQFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAWA L
Sbjct: 340 SIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARL 391
Score = 102 bits (245), Expect = 9e-23
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 7e-24
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
++QFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 SVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 7e-24
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
++QFVDWCPTGFKVGINYQPPTVVP GDLAKV RAVCMLSNTTAIAEAW+ L
Sbjct: 338 SVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRL 389
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 105 bits (253), Expect = 9e-24
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -1
Query: 400 IQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
IQFVDWCPTGFKVGINYQPPTVVP GD+AK+QRAVCMLSNTTAI EAWA L
Sbjct: 341 IQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARL 391
Score = 101 bits (243), Expect = 1e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEARED++ALEKDYEEVG+DS
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 105 bits (252), Expect = 1e-23
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
+IQFVDWCPTGFKVGINYQPPTVVP DL+K+QRAVCMLSNTTAIAEAWA L
Sbjct: 345 SIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARL 396
Score = 101 bits (243), Expect = 1e-22
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG+D+
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 103 bits (247), Expect = 5e-23
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
++QFVDWCPTGFKVG+NYQPPTV+P GD+AKV RAVCMLSNTTAIAEAW L
Sbjct: 335 SVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRL 386
Score = 99.5 bits (237), Expect = 8e-22
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEFSEAREDL+ALEKDYEEVG DS
Sbjct: 385 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 434
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 101 bits (242), Expect = 2e-22
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
T+QFV+WCPTGFKVGINYQPPTVVP GDL K R+VCM+SNTTAIAEAWA L
Sbjct: 346 TVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARL 397
Score = 98.7 bits (235), Expect = 1e-21
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMD 108
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEARED++ALEKDYEE+G D
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 444
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 101 bits (242), Expect = 2e-22
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1
Query: 403 TIQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
T+QFV+WCPTGFKVGINYQPPTVVP GDL K R+VCM+SNTTAIAEAWA L
Sbjct: 318 TVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARL 369
Score = 98.7 bits (235), Expect = 1e-21
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMD 108
RLDHKFDLMYAKRAFVHW VGEGM EGEFSEARED++ALEKDYEE+G D
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGED 416
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 98.3 bits (234), Expect = 2e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLD+KFDLMYAKRAFVHW VGEGM EGEF+EAREDL+ALEKDYEEVG DS
Sbjct: 25 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 74
Score = 33.5 bits (73), Expect = 0.059
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -1
Query: 298 VCMLSNTTAIAEAWAAL 248
VCMLS+TTAIAEAW+ L
Sbjct: 10 VCMLSDTTAIAEAWSRL 26
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 95.5 bits (227), Expect = 1e-20
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = -1
Query: 400 IQFVDWCPTGFKVGINYQPPTVVPXGDLAKVQRAVCMLSNTTAIAEAWAAL 248
I FVDWCPTGFKVGINYQ P V GDLAKV RAVCMLSNTTAIAEAWA L
Sbjct: 344 INFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARL 394
Score = 91.5 bits (217), Expect = 2e-19
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEEVGMDS 105
RLDHKFDLMY+KRAFVHW VGEGM EGEF EAR+DL+ALEKDY EV D+
Sbjct: 393 RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 49.6 bits (113), Expect = 8e-07
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 49.6 bits (113), Expect = 8e-07
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 49.6 bits (113), Expect = 8e-07
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 49.6 bits (113), Expect = 8e-07
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 49.2 bits (112), Expect = 1e-06
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 49.2 bits (112), Expect = 1e-06
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -3
Query: 254 RLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
R+ +F M+ ++AF+HW GEGM E EF+EA +++ L +Y++
Sbjct: 380 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = -3
Query: 260 LGRLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
L R+ +F ++ ++AF+HW M E EF++A ++ L ++++
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQ 419
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = -3
Query: 260 LGRLDHKFDLMYAKRAFVHWXVGEGMXEGEFSEAREDLSALEKDYEE 120
L R+ +F ++ ++AF+HW M E EF++A ++ L ++++
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQ 419
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 29.1 bits (62), Expect = 1.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 406 GTIQFVDWCPTGFKVGINY 350
G +DWCP +VG+NY
Sbjct: 336 GIPSLIDWCPQAAEVGVNY 354
>U97008-14|AAB52302.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein56 protein.
Length = 298
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 57 YFIGLVLFGSLTLXFSGVHADFFVILLEGRQVLTGF 164
YF +VLF T+ H FF++ L +LT F
Sbjct: 60 YFCPMVLFDQSTMKQYSHHCGFFILFLSEFSILTHF 95
>AF016448-3|AAB65958.1| 217|Caenorhabditis elegans Hypothetical
protein F41E6.8 protein.
Length = 217
Score = 27.1 bits (57), Expect = 5.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 406 GTIQFVDWCPTGFKVGINY 350
G ++WCPT +VG+ Y
Sbjct: 43 GIPNLINWCPTAAEVGVTY 61
>Z98851-2|CAB11536.1| 324|Caenorhabditis elegans Hypothetical
protein H12I19.2 protein.
Length = 324
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 91 VREPKSTKPMKYLLWRTRTV 32
V K +KP KY+LW+T V
Sbjct: 221 VLSAKQSKPQKYILWQTMIV 240
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 6.8
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 71 STLRLPHPRLQRSPCRLLRNPSRGQTGPHGLR---RTLPPXYPHRRTS 205
S R P P+ + P R R+PS ++ P R R+ P P RR S
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRS 442
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -1
Query: 301 AVCMLSNTTAIAEAWAALTTSSTSCTPSVLSCT 203
A C L ++++ + + ++ ++S+SCT S SC+
Sbjct: 163 ATCSLCSSSSDSSSSSSTASTSSSCTDSASSCS 195
>Z70684-10|CAA94602.2| 684|Caenorhabditis elegans Hypothetical
protein F28D1.9 protein.
Length = 684
Score = 26.6 bits (56), Expect = 6.8
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 33 TVRVRHKRYFIGLVLFGSLTLXFSGVHADF-FVILLEGRQVLTGFGELSLLHTLTDXPVH 209
TV V + IG++L G L L + VH DF + L + LTG + + +H
Sbjct: 47 TVAVIAQNLPIGVILAGVLILYITVVHGDFIYRSYLTLNRDLTGLALIIEVKIDLWWRLH 106
Query: 210 ESTLGVHE--VELVVKAAQASAMAVVLDN 290
++ G+HE +++V K AM + N
Sbjct: 107 QNK-GIHELFLDIVKKNPNKPAMIDIETN 134
>AC006809-2|AAF59625.1| 160|Caenorhabditis elegans Hypothetical
protein Y5H2A.1 protein.
Length = 160
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 406 GTIQFVDWCPTGFKVGINY 350
G + WCPT +VG+ Y
Sbjct: 63 GIPNLISWCPTAEEVGVTY 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,242,150
Number of Sequences: 27780
Number of extensions: 135478
Number of successful extensions: 495
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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