Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0400.Seq
(406 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 1.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 2.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 4.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 4.0
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 7.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 7.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 7.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 9.3
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 20 9.3
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 80 RLPHPRLQRSP 112
R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 80 RLPHPRLQRSP 112
R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 377 NRFQGRYQLPA 345
NRF G Y++PA
Sbjct: 435 NRFSGEYEIPA 445
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 65 WLSTLRLPHPRLQR 106
++S R PHPRL+R
Sbjct: 104 YISQPRPPHPRLRR 117
Score = 21.4 bits (43), Expect = 4.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 65 WLSTLRLPHPRLQR 106
++S R PHPRL+R
Sbjct: 160 YISQPRPPHPRLRR 173
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 4.0
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 396 NSSTGVQPVSR-SVSTTSHPPWCP 328
++S+G + R S+S T PP CP
Sbjct: 546 STSSGDDELHRASLSKTPQPPQCP 569
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 172 SPSXIPSPTXQCTKARLAYMRS 237
SP+ PSP QC RS
Sbjct: 740 SPNASPSPAEQCASTTTITARS 761
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +2
Query: 146 TGPHGLRRTLPPXYPHRRTSARKH 217
T P G + + P P+ S KH
Sbjct: 85 TSPSGQNKAVAPYPPNHPLSGSKH 108
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 57 IFYGALAPFYIPV 19
+ Y AL FYIP+
Sbjct: 248 VVYSALGSFYIPM 260
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +2
Query: 146 TGPHGLRRTLPPXYPHRRTSARKH 217
T P G + + P P+ S KH
Sbjct: 85 TSPSGQNKAVAPYPPNHPLSGSKH 108
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 131 PSRGQTGPHGLRRTLPP 181
P RG++ LR LPP
Sbjct: 1839 PRRGRSSRSSLRTLLPP 1855
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 131 PSRGQTGPHGLRRTLPP 181
P RG++ LR LPP
Sbjct: 1835 PRRGRSSRSSLRTLLPP 1851
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 365 GRYQLPATHRGARRRLGQGS 306
G+Y P H G+R +G+ S
Sbjct: 1825 GQYGAPYDHYGSRGSVGRRS 1844
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -3
Query: 383 VSNRFQGRYQLPATHRGARRR 321
V RF+G+Y +P G+ ++
Sbjct: 44 VRRRFKGQYLMPNIGYGSNKK 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,776
Number of Sequences: 438
Number of extensions: 1754
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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