Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0399.Seq
         (396 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    22   9.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.4  

>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +1

Query: 139 WLCLIKYKS 165
           WLCL++Y+S
Sbjct: 44  WLCLVEYES 52


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 47   NHSNTFFFWKVKYRIKTKTRVVNITSVYRSN 139
            NH + +  ++ +YR++       I+SVYR+N
Sbjct: 2422 NHQHFYTGFR-RYRLEYVKNTNKISSVYRTN 2451


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 47   NHSNTFFFWKVKYRIKTKTRVVNITSVYRSN 139
            NH + +  ++ +YR++       I+SVYR+N
Sbjct: 2423 NHQHFYTGFR-RYRLEYVKNTNKISSVYRTN 2452


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,486
Number of Sequences: 2352
Number of extensions: 5549
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)