Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0396.Seq
(408 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-P... 254 3e-68
AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-P... 254 3e-68
U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog pro... 253 6e-68
AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p pro... 253 6e-68
BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p pro... 185 2e-47
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 3.1
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro... 28 4.1
AY047535-1|AAK77267.1| 640|Drosophila melanogaster GH04440p pro... 28 4.1
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ... 28 4.1
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA... 28 5.4
BT016009-1|AAV36894.1| 1058|Drosophila melanogaster RE24187p pro... 27 7.2
BT011019-1|AAR30179.1| 1067|Drosophila melanogaster RE59722p pro... 27 7.2
AY051973-1|AAK93397.1| 316|Drosophila melanogaster LD43650p pro... 27 7.2
AF176011-1|AAD52649.1| 316|Drosophila melanogaster mitochondria... 27 7.2
AE014297-89|AAF52127.2| 1088|Drosophila melanogaster CG9809-PA, ... 27 7.2
AE014297-88|AAN13314.2| 1067|Drosophila melanogaster CG9809-PB, ... 27 7.2
AE014297-87|AAN13315.2| 1079|Drosophila melanogaster CG9809-PC, ... 27 7.2
AE014296-29|AAN11421.1| 316|Drosophila melanogaster CG6851-PC, ... 27 7.2
AE014296-28|AAN11420.1| 316|Drosophila melanogaster CG6851-PB, ... 27 7.2
AE014296-27|AAF47342.1| 316|Drosophila melanogaster CG6851-PA, ... 27 7.2
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein. 27 7.2
AY060997-1|AAL28545.1| 619|Drosophila melanogaster HL01392p pro... 27 9.5
AE014297-1191|AAF54549.3| 619|Drosophila melanogaster CG6544-PA... 27 9.5
>AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-PA,
isoform A protein.
Length = 231
Score = 254 bits (622), Expect = 3e-68
Identities = 116/131 (88%), Positives = 120/131 (91%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71
Query: 195 QLSSEALEAGXYLLQ*VPRKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 374
QLSSEALEAG K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131
Query: 375 FGKPQGTVARV 407
FGKPQGTVARV
Sbjct: 132 FGKPQGTVARV 142
>AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-PB,
isoform B protein.
Length = 237
Score = 254 bits (622), Expect = 3e-68
Identities = 116/131 (88%), Positives = 120/131 (91%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77
Query: 195 QLSSEALEAGXYLLQ*VPRKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 374
QLSSEALEAG K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137
Query: 375 FGKPQGTVARV 407
FGKPQGTVARV
Sbjct: 138 FGKPQGTVARV 148
>U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog
protein.
Length = 218
Score = 253 bits (620), Expect = 6e-68
Identities = 116/129 (89%), Positives = 119/129 (92%)
Frame = +3
Query: 21 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 201 SSEALEAGXYLLQ*VPRKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 380
SSEALEAG K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 381 KPQGTVARV 407
KPQGTVARV
Sbjct: 121 KPQGTVARV 129
>AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p
protein.
Length = 218
Score = 253 bits (620), Expect = 6e-68
Identities = 116/129 (89%), Positives = 119/129 (92%)
Frame = +3
Query: 21 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 201 SSEALEAGXYLLQ*VPRKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 380
SSEALEAG K CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 381 KPQGTVARV 407
KPQGTVARV
Sbjct: 121 KPQGTVARV 129
>BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p
protein.
Length = 197
Score = 185 bits (450), Expect = 2e-47
Identities = 96/131 (73%), Positives = 100/131 (76%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64
Query: 195 QLSSEALEAGXYLLQ*VPRKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 374
QLSSEALEAG R C K MLSCAGADRLQTGMRGA
Sbjct: 65 QLSSEALEAG--------RICCNK-------------------MLSCAGADRLQTGMRGA 97
Query: 375 FGKPQGTVARV 407
FGKPQGTVARV
Sbjct: 98 FGKPQGTVARV 108
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 219 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 79
PPK S+ +RTP+ + S+ R SWD V+ R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590
>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
Length = 1233
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143
>AY047535-1|AAK77267.1| 640|Drosophila melanogaster GH04440p
protein.
Length = 640
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 519 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 550
>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
protein.
Length = 1233
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143
>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
protein.
Length = 1995
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 177 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 55
P+ R V S S+S S P G D PD+ SI++ Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452
>BT016009-1|AAV36894.1| 1058|Drosophila melanogaster RE24187p
protein.
Length = 1058
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 237 AADTVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRT 82
AA +V KP++ TP+ R+ +L Y RR G V+P T
Sbjct: 424 AALSVCAAKPIAPPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPT 475
>BT011019-1|AAR30179.1| 1067|Drosophila melanogaster RE59722p
protein.
Length = 1067
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 237 AADTVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRT 82
AA +V KP++ TP+ R+ +L Y RR G V+P T
Sbjct: 433 AALSVCAAKPIAPPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPT 484
>AY051973-1|AAK93397.1| 316|Drosophila melanogaster LD43650p
protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 294 HPFHVIRINKMLSCAGADRLQTGMRGA 374
HPFHVI + M G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176
>AF176011-1|AAD52649.1| 316|Drosophila melanogaster mitochondrial
carrier homolog protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 294 HPFHVIRINKMLSCAGADRLQTGMRGA 374
HPFHVI + M G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176
>AE014297-89|AAF52127.2| 1088|Drosophila melanogaster CG9809-PA,
isoform A protein.
Length = 1088
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 237 AADTVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRT 82
AA +V KP++ TP+ R+ +L Y RR G V+P T
Sbjct: 433 AALSVCAAKPIAPPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPT 484
>AE014297-88|AAN13314.2| 1067|Drosophila melanogaster CG9809-PB,
isoform B protein.
Length = 1067
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 237 AADTVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRT 82
AA +V KP++ TP+ R+ +L Y RR G V+P T
Sbjct: 433 AALSVCAAKPIAPPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPT 484
>AE014297-87|AAN13315.2| 1079|Drosophila melanogaster CG9809-PC,
isoform C protein.
Length = 1079
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 237 AADTVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRT 82
AA +V KP++ TP+ R+ +L Y RR G V+P T
Sbjct: 424 AALSVCAAKPIAPPTLSTTTPTLTPPAKRKLNLEEYKQRRCGGVGAVYPKPT 475
>AE014296-29|AAN11421.1| 316|Drosophila melanogaster CG6851-PC,
isoform C protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 294 HPFHVIRINKMLSCAGADRLQTGMRGA 374
HPFHVI + M G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176
>AE014296-28|AAN11420.1| 316|Drosophila melanogaster CG6851-PB,
isoform B protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 294 HPFHVIRINKMLSCAGADRLQTGMRGA 374
HPFHVI + M G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176
>AE014296-27|AAF47342.1| 316|Drosophila melanogaster CG6851-PA,
isoform A protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 294 HPFHVIRINKMLSCAGADRLQTGMRGA 374
HPFHVI + M G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176
>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
Length = 1990
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 177 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 55
P R V S S+S S P G D PD+ SI++ Y C
Sbjct: 410 PGPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452
>AY060997-1|AAL28545.1| 619|Drosophila melanogaster HL01392p
protein.
Length = 619
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 262 PQFLRGTYCSRYXPASKASEL-SCSYSSDTKC-THSGKSSTVALFLPKSKIRILGS 101
P +L TY S Y P S + S +YS T ++ +SS L + S +R++ S
Sbjct: 112 PSYLPSTYTSTYIPTSYTTYTPSYAYSPTTVTRVYAPRSSLSPLRITPSPVRVITS 167
>AE014297-1191|AAF54549.3| 619|Drosophila melanogaster CG6544-PA,
isoform A protein.
Length = 619
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 262 PQFLRGTYCSRYXPASKASEL-SCSYSSDTKC-THSGKSSTVALFLPKSKIRILGS 101
P +L TY S Y P S + S +YS T ++ +SS L + S +R++ S
Sbjct: 112 PSYLPSTYTSTYIPTSYTTYTPSYAYSPTTVTRVYAPRSSLSPLRITPSPVRVITS 167
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,757,679
Number of Sequences: 53049
Number of extensions: 440898
Number of successful extensions: 1313
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -