Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0395.Seq
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   9.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   9.9  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    22   9.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   9.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 63  LCQYCSYTS 89
           +C YC+YTS
Sbjct: 128 MCNYCNYTS 136


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 98  QQRRLLQVPHRQQNPLQINRMHRQMPQV 181
           QQ++  Q  H Q   LQ  + H   PQ+
Sbjct: 128 QQQQQQQQQHHQHQQLQQQQHHYYTPQL 155


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
          protein.
          Length = 380

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 78 YNTDIVANQDGGENSHATQTHCC 10
          + TD+ A QDG   SH  ++  C
Sbjct: 13 FATDLFALQDGESCSHQGESGVC 35


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 67  HSSKPRWRR 41
           H  KPRWRR
Sbjct: 238 HRRKPRWRR 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,558
Number of Sequences: 2352
Number of extensions: 3425
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)