Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0393.Seq
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.38 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    20   8.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   8.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 394 ICDIPNPCLSGCVCNSYYKHRSVSDNQCIPAKEC 293
           +CD  +PCL+G  C  +  H +         K+C
Sbjct: 64  LCD-SSPCLNGATCQDHTTHYTCHCPYGYTGKDC 96



 Score = 21.4 bits (43), Expect = 3.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 231 RELQRCGQSECSVRR 187
           ++ Q+C Q++C V+R
Sbjct: 483 KQRQQCNQNKCPVKR 497


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -1

Query: 181 AKPNPVACATRIILETTTECVCQLKNVLPTSSILNTDGRRMAFV 50
           ++P+P    + + +  + + VC   N+L   S+ +T G  +  V
Sbjct: 225 SRPSPATIISNVTV-ISWQAVCTFYNILLCDSVAHTAGELLGAV 267


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -1

Query: 181 AKPNPVACATRIILETTTECVCQLKNVLPTSSILNTDGRRMAFV 50
           ++P+P    + + +  + + VC   N+L   S+ +T G  +  V
Sbjct: 225 SRPSPATIISNVTV-ISWQAVCTFYNILLCDSVAHTAGELLGAV 267


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -1

Query: 181 AKPNPVACATRIILETTTECVCQLKNVLPTSSILNTDGRRMAFV 50
           ++P+P    + + +  + + VC   N+L   S+ +T G  +  V
Sbjct: 545 SRPSPATIISNVTV-ISWQAVCTFYNILLCDSVAHTAGELLGAV 587


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 299  FGGDTLIVTDASVLIVGVTNTSR 367
            FG + LI+T A  L+VG    S+
Sbjct: 1330 FGLNFLIITQAMFLVVGQLQASQ 1352


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 324 VTINVSPPKSVHRSSAPDRMKSG 256
           VT+  +P   VH S   D +KSG
Sbjct: 688 VTLGGTPYVGVHSSELLDFLKSG 710


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 336 TEASVTINVSPPKS 295
           TE +   NVSPPK+
Sbjct: 62  TEINAFANVSPPKT 75


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 292 DTLWRGYIDCH*RFGAYSRSYKHIQKG 372
           D + R Y+DC    G  ++  + ++KG
Sbjct: 35  DQMTRNYLDCVLDKGKCTKEAEKLKKG 61


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +3

Query: 87  DDVGRTFFSWHTHSV 131
           +D+G     WH H V
Sbjct: 199 EDIGLNLHHWHWHLV 213


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 333 EASVTINVSPPKSVHRSSAPDRMKSG 256
           E S T   SPP S     +PD+  +G
Sbjct: 530 EISFTFPPSPPLSQIHDLSPDQFCNG 555


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 224 SSRIGTSMDKIPDFIRSGALDRWTLF 301
           SS++GT       ++RS   DR+ +F
Sbjct: 159 SSQLGTGGSSGYQYLRSTLSDRYKVF 184


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 224 SSRIGTSMDKIPDFIRSGALDRWTLF 301
           SS++GT       ++RS   DR+ +F
Sbjct: 319 SSQLGTGGSSGYQYLRSTLSDRYKVF 344


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 224 SSRIGTSMDKIPDFIRSGALDRWTLF 301
           SS++GT       ++RS   DR+ +F
Sbjct: 319 SSQLGTGGSSGYQYLRSTLSDRYKVF 344


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 36  IVTIFTNAIRLPSVFSIDDVGRTFFS 113
           ++T F  ++R+  VFS   V ++FF+
Sbjct: 69  MLTFFNVSLRIILVFSKGKVIKSFFN 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,934
Number of Sequences: 336
Number of extensions: 2098
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)