Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0392.Seq
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   3.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   4.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   4.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   8.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   8.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   8.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 262 FGSQPMHRRR*RIYYWSSVHCTPRLYRNSC 351
           FG+  ++    R YYW +++ T +    SC
Sbjct: 143 FGATKVYNSMKREYYWPNMYRTIKKRLRSC 172


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREK 156
           K  +K    D  E E  DT+  D   K + +EK
Sbjct: 240 KDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEK 272


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = -3

Query: 263 NXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
           N  ++++K +    + K KTD  +      + +REK++  +
Sbjct: 137 NARRRLKKENKMTWEPKNKTDDDDDALVSDSDDREKDEEDK 177


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 191 NFLCQFFPFPFY 226
           NF+  FF  PFY
Sbjct: 359 NFVSTFFKIPFY 370


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 102 RGIPRVAALTLIH 140
           +GIPR+A+L L H
Sbjct: 415 KGIPRLASLNLGH 427


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = +2

Query: 35   SARLCQSTFLFLYSLFGQICLTPRNP--ESC 121
            S R C  +F  L SL   + L P NP  E C
Sbjct: 973  SNRCCGGSFPLLRSLNRGLGLIPDNPSREDC 1003


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -3

Query: 266 PNXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 144
           PN    V+ +S  + K  +++   N D    TS+ + +  S
Sbjct: 60  PNLNPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNES 100


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +2

Query: 2   FFYFEYVHFLKSARLCQSTFLFLYSLFGQICL 97
           +FY+ ++ F          + F+  LF  +C+
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 376 RSVNSGSERKSSGKDEEYSEQ 314
           +S + G +RKS   DEE S Q
Sbjct: 58  KSRSFGRKRKSISSDEENSFQ 78


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 337 KDEEYSEQNSSNKSFNDGDASADYQ 263
           KDE       S+  FND   + +YQ
Sbjct: 192 KDETCQYDTESSYQFNDPQFNFNYQ 216


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 337 KDEEYSEQNSSNKSFNDGDASADYQ 263
           KDE       S+  FND   + +YQ
Sbjct: 212 KDETCQYDTESSYQFNDPQFNFNYQ 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,010
Number of Sequences: 336
Number of extensions: 1316
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)