Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0392.Seq
(406 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 34 0.049
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 31 0.35
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 31 0.35
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 31 0.46
05_05_0299 - 23930657-23932627 30 0.61
09_02_0250 + 6266818-6267029,6267230-6267287,6267999-6268118,627... 30 0.80
07_03_1788 + 29523216-29524867,29525048-29525075 30 0.80
07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020... 30 0.80
08_02_1325 - 26146775-26147247,26147397-26148579 29 1.1
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 1.8
09_02_0406 - 8629287-8629304,8629384-8629865,8629977-8630291,863... 28 2.4
12_02_1267 - 27448871-27450445 28 3.2
05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598 27 4.3
04_04_0093 + 22767103-22767295,22767557-22767596,22767888-227679... 27 4.3
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 27 5.6
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 27 5.6
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 27 5.6
05_07_0012 + 27041475-27042476 27 7.5
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 27 7.5
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 27 7.5
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 27 7.5
02_03_0382 + 18352508-18352841,18353817-18354028,18354190-183542... 27 7.5
12_02_0535 + 20117205-20117401,20118556-20118628,20118725-201187... 26 9.9
12_01_1079 - 11223247-11223336,11223606-11223717,11224743-112248... 26 9.9
11_06_0649 + 25882657-25882782,25882983-25883175,25883354-25884120 26 9.9
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 26 9.9
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 26 9.9
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 26 9.9
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 26 9.9
01_05_0092 - 18058555-18060084 26 9.9
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 26 9.9
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 33.9 bits (74), Expect = 0.049
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = -1
Query: 388 RDKNRSVNSGSERKSSGKDEE-YSEQNSSNKSFNDGDASADYQTXSRRLK-RILPEIKRK 215
R ++RS +SGS +S + E YS+ ++ ++S D + + RR K R E +R+
Sbjct: 92 RRRSRSASSGSSSESESESESSYSDCSAGSESETDSEEERRRRRRRRRRKEREEEERRRR 151
Query: 214 RKKLTQEILTERTKLLSAKKNNLLE*IKVRAATLGIPRSQTN 89
RK + E+ + KK + K LG + TN
Sbjct: 152 RKDKERRKRKEKERERERKKKEKKKRRKEEKKNLGKKAAVTN 193
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 31.1 bits (67), Expect = 0.35
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -1
Query: 391 YRDKNRSVNSGSERKSSG-KDEEYSE-QNSSNK-SFNDGDASADYQTXSRRLKRILPEIK 221
Y DK +GS R SSG +DE+ SE Q S N+ N + ++T + +I P +
Sbjct: 117 YEDKRWIPRNGSSRPSSGARDEKSSESQTSVNRGGHNQRSSFEQHRTSPAAVSKIAPVVS 176
Query: 220 R 218
R
Sbjct: 177 R 177
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 31.1 bits (67), Expect = 0.35
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 367 NSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRL--KRILPEIKRK 215
N +E +G+D S+ +SS+ S +D D S+D +T L + L +KRK
Sbjct: 324 NEENEGNETGEDSSSSDDDSSDSSSDDSDESSDEETALAVLPAQAALSVLKRK 376
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 364 SGSERKSSGKDEEYSEQNSSNKSF----NDGDASADYQTXSRRLKRILPEIKRKRKKLTQ 197
SG+ + G+ +E S+ +++ +D D + +R K L E+++ +K+ Q
Sbjct: 80 SGAAAAAPGEGDEESQSTEDDEAVVGEDDDADEAEGGAVVGKREKARLKEMQKLKKQKIQ 139
Query: 196 EILTERTKLLSAKKNN 149
EIL + + A NN
Sbjct: 140 EILDTQNAAVDADMNN 155
>05_05_0299 - 23930657-23932627
Length = 656
Score = 30.3 bits (65), Expect = 0.61
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = -1
Query: 355 ERKSSG---KDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILT 185
ERK G +EE E + ++S +D D +A SRR+ R + E+ R+ ++ IL
Sbjct: 58 ERKKKGLVPPEEEEEEDDDDDESLSDDDDAA---IASRRVDRQMFEVIRRIRRGDAAILD 114
Query: 184 ERTKLLSAKKNN 149
+ K+ S+ +
Sbjct: 115 AKAKMYSSSSES 126
>09_02_0250 +
6266818-6267029,6267230-6267287,6267999-6268118,
6272359-6272511,6273381-6273586,6274280-6274733,
6276573-6276610,6276923-6277046,6277184-6277246,
6277350-6277412,6277526-6278152,6278267-6278294,
6278373-6278413,6278689-6278851,6278987-6279039,
6279217-6279262,6279373-6279444,6279578-6279741,
6279968-6280099,6280249-6280565,6280721-6280892,
6281009-6281107,6281275-6281349,6281446-6281504,
6281647-6281836,6281982-6282020
Length = 1255
Score = 29.9 bits (64), Expect = 0.80
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 346 SSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKL 170
S G DE + E ++ + D D DY K I+ +KRK KK +L E K+
Sbjct: 445 SDGSDENFREDDTES----DDDFDMDYVMLELYRKTIVQSMKRKMKK-NSNVLLENQKM 498
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -1
Query: 295 FNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEI 191
F+DGD S+DY+ R++KR L + + KK+ QE+
Sbjct: 429 FDDGDTSSDYE--GRKMKR-LSQNRSFNKKMKQEV 460
>07_03_0438 -
18200329-18200430,18201203-18201335,18201964-18202034,
18202377-18202466,18203200-18203288,18203886-18203961,
18204094-18204264
Length = 243
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 271 DYQTXSRRLKRILPEIKRKRKKLTQEILTERTKLL 167
DY++ S L +LP+ RK K+L+ L E TK+L
Sbjct: 80 DYKSNSGNLPALLPDQVRKLKQLSVLTLAESTKVL 114
>08_02_1325 - 26146775-26147247,26147397-26148579
Length = 551
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
K E R ++ KEK R D K +REK + R N+
Sbjct: 22 KKESKERRGRERKEKNSDRRKDKHSKKHKREKHKDKRKNK 61
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = -1
Query: 400 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEIK 221
S+ +DK +E++ K+EE + N K + + D + +L + K
Sbjct: 190 SADKKDKEEETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEK 249
Query: 220 RKRKK 206
K K+
Sbjct: 250 EKEKE 254
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 266 PNXIKKVE-KNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
P+ + +E K +DKK+K++ + D Y +R K++ R+ +
Sbjct: 1420 PDSMNGLETKEKKKDKKDKKRHRDKKDDPEYLEKKRLKKEKKRMEK 1465
>09_02_0406 -
8629287-8629304,8629384-8629865,8629977-8630291,
8630381-8630576
Length = 336
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
E+ T + + R+V GS+ ++ + E + + D DA ++ + SR K ++ +
Sbjct: 121 EAGTSKKRKRAVAKGSQVRTRRSVKTAVENDGEEEDEEDADAGSE-EDGSRAAKPMM-AV 178
Query: 223 KRKRKK 206
+RK KK
Sbjct: 179 RRKNKK 184
>12_02_1267 - 27448871-27450445
Length = 524
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -3
Query: 233 ARDKKEKEKTDTRNSDGTYKTSEREKEQSSRV 138
+ DKK+K+ +D + D +E+EK+++S+V
Sbjct: 315 SNDKKKKKSSDEDDDDKPKLPTEQEKDEASKV 346
>05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598
Length = 287
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 346 SSGKDEEYSEQNSSNKSFNDGDASADY---QTXSRRLKR 239
SS D E S + SN S ++ A+ADY QT +RL R
Sbjct: 245 SSSSDGERSADSDSNHSDDETFAAADYNAVQTTDKRLHR 283
>04_04_0093 +
22767103-22767295,22767557-22767596,22767888-22767915,
22768134-22768189,22768300-22768386,22768468-22768564
Length = 166
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Frame = -3
Query: 254 KKVEKNSARDKK---EKEKTDTRNSD-GTYKTSE 165
K ++K++ RDK+ E+++ D+ NSD GTY SE
Sbjct: 70 KVLDKHTNRDKRRIFEEKEADSSNSDSGTYVVSE 103
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 397 STYRDKNRSVNSGSERKSSGKDEEY-SEQNSSNKSFNDGDASADYQ 263
S Y D + SVNS S + + +Y S N++++ DA A Q
Sbjct: 827 SNYEDPSSSVNSASHSDNELNNSQYGSNDIKLNEAYSGFDAQASQQ 872
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -3
Query: 245 EKNSARDKKEKEKTDTRNSDGTYKTSEREKEQ 150
+++ RD+ EK++ R+ D ++ +REKE+
Sbjct: 94 DRDRDRDRDEKDREKERDKDKERRSRDREKEK 125
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGTY 177
+++ E+ + DKK KE+ D RN TY
Sbjct: 548 VREAEEFAEEDKKVKERIDARNQLETY 574
>05_07_0012 + 27041475-27042476
Length = 333
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 400 SSTYRDKNRSVNSGSERKSSGKDEEY-SEQNSSNKSFNDGDASAD 269
SST R N S +S S G D+E + N +K NDG+A D
Sbjct: 128 SSTRRQSNASTSSSSGGIGGGDDDEAPNVMNGGDK--NDGNALPD 170
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 257 IKKVEKNSARDKKEKEKTDTRNSDGT--YKTSEREKEQSSRV 138
+++ EK + DK++++ DT+N + Y+T ++ KE +V
Sbjct: 493 VEEAEKFAKEDKEKRDAIDTKNQAESVIYQTEKQLKELGDKV 534
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
K EK +DKK+KE+ + ++ ++ ++ +++ R
Sbjct: 96 KHKEKKHKKDKKDKERKEGKDKKDKERSKDKHRDKKDR 133
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 26.6 bits (56), Expect = 7.5
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = -1
Query: 400 SSTYRDKNRSVNSGSERKSSGKDE-EYSEQNSSNKSFNDGDASADYQTXSRRLKRILPEI 224
+S Y DK+R VNS + +SS E + S + +S G S + S L+++ E+
Sbjct: 259 TSIYPDKDRRVNSSTGTESSKPSELKGSNEVLRQESLLQGMLSDNKDHISTELEKLRLEL 318
Query: 223 K--RKRKKLTQE 194
+ + + KL Q+
Sbjct: 319 RLIQGKHKLVQD 330
>02_03_0382 +
18352508-18352841,18353817-18354028,18354190-18354277,
18355017-18355474
Length = 363
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 251 KVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSS 144
K EK D+KEKEK ++ + ++EK+ S+
Sbjct: 284 KEEKKEGDDEKEKEKEKDDSNAAEVEEKDKEKDPSA 319
>12_02_0535 +
20117205-20117401,20118556-20118628,20118725-20118787,
20119167-20119220,20119303-20119359,20119615-20119707
Length = 178
Score = 26.2 bits (55), Expect = 9.9
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = -1
Query: 388 RDKNRSVNSGSERKSSGKDEEYSEQNSSNKS-------FNDGDASADYQTXSRRLKRILP 230
R++ RS + S+R S E Y+E+NS S F D Q + K+I+
Sbjct: 92 RERERSKDRHSKRDKSKHKELYTEENSERTSGPVQLSKFLGRDKDEGVQRSAISGKKIMM 151
Query: 229 EI-KRKRKKLTQEILTERTKLLSA 161
++ K K K + E K L+A
Sbjct: 152 KLEKSKEDKQAESKRNELLKFLNA 175
>12_01_1079 -
11223247-11223336,11223606-11223717,11224743-11224825,
11226061-11226173,11226261-11226337,11228626-11228719,
11229072-11229160,11230485-11230560,11231637-11231808
Length = 301
Score = 26.2 bits (55), Expect = 9.9
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = -3
Query: 254 KKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQXXXXXXXXXXXXXXXXRKV 75
KK+E + K+ K TDT S+ ++ + + Q KV
Sbjct: 167 KKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVAAKVKSDEEKDEWFVVKV 226
Query: 74 ---NKETETYSDKDAQTSESERTQSK 6
+KET+ Y D + + E + K
Sbjct: 227 IHFDKETKEYEVLDEEPGDDEESAQK 252
>11_06_0649 + 25882657-25882782,25882983-25883175,25883354-25884120
Length = 361
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 227 DKKEKEKTDTRNSDGTYKTSEREKEQSSRVNQ 132
+K+EK + D +N++ + SERE+E+ + Q
Sbjct: 244 EKREKCEQDGKNTEEDKEESEREEEEKTTEEQ 275
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 233 ARDKKEKEKTDTRNSDGTYKTSEREKEQSSR 141
+RD+++KEK R D ERE+E+ R
Sbjct: 55 SRDEEDKEKKARRGGDFAGAGEEREEEEVGR 85
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 266 PNXIKKVEKNSARDKKEKEKTDTRNSDGTYKTSEREKEQS 147
P K+ E + + KEKEK NS+ + +E +++ S
Sbjct: 753 PESKKEKENSENPESKEKEKERKENSENKEEKTENKQDNS 792
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 26.2 bits (55), Expect = 9.9
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = -1
Query: 406 AESSTYRDKN-----RSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLK 242
AE T D+N R S S KSSG D + SE S ++ D D S +
Sbjct: 348 AEDETDDDENIYFDTRDFLSSSSFKSSGSDFQRSEAGSD----DEDDYPMDGIDTSMKSV 403
Query: 241 RILPEIKRKRKKLTQEILTERTK 173
I R+RKKL + E+ K
Sbjct: 404 GISYPYVRRRKKLPDPVEKEKGK 426
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = -1
Query: 313 NSSNKSFNDGDASADYQTXSRRLKRILPEIKRKRKKLTQEILTERTKLLSAKKNNL 146
N + DG + D ++ + LK +L ++K KKL + K+N +
Sbjct: 395 NGEEQLLKDGISVKDLRSGIKELKNLLENFEKKNKKLASNQAKKPAHTDQPKENKI 450
>01_05_0092 - 18058555-18060084
Length = 509
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 287
+SS RD+ +S + KS +DEE S + +SF+D
Sbjct: 390 QSSLARDEQKSF--ARDEKSLARDEEKSLASDEQRSFDD 426
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 26.2 bits (55), Expect = 9.9
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 403 ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTXSRRLK-RILPE 227
E + + K SGS +KS+GK E N S +D D S D + + K R
Sbjct: 529 ERNREKAKEFVYGSGSRKKSNGKHE--------NSSDDDSDGSCDGKKKKKAKKTRFTHT 580
Query: 226 IKRKRKKLT 200
IK K K T
Sbjct: 581 IKGKGKSKT 589
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,760,967
Number of Sequences: 37544
Number of extensions: 126928
Number of successful extensions: 665
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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